RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SMCR8Q8TEV9 937 aaPredicted RBP21.67■■□□□ 1.06
CCM2-214ENST00000481194 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 CCPG1Q9ULG6 757 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 DNM3Q9UQ16 869 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 POLR2DO15514 142 aaKnown RBP21.67■■□□□ 1.06
CCM2-214ENST00000481194 MYL5Q02045 173 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 NCAPH2Q6IBW4 605 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 GPKOWQ92917 476 aaPredicted RBP eCLIP21.67■■□□□ 1.06
CCM2-214ENST00000481194 DAGLAQ9Y4D2 1042 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 SLIT2O94813 1529 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 PPP1R18Q6NYC8 613 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 TMTC3Q6ZXV5 915 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 SGMS1Q86VZ5 419 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 C12orf60Q5U649 245 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 GADL1Q6ZQY3 521 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 USP28Q96RU2 1077 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 ESPNB1AK53 854 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 ZNF445P59923 1031 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 NCBP1Q09161 790 aaKnown RBP21.66■■□□□ 1.06
CCM2-214ENST00000481194 VPS33BQ9H267 617 aa21.66■■□□□ 1.06
CCM2-214ENST00000481194 TDRD3Q9H7E2 651 aaKnown RBP21.66■■□□□ 1.06
CCM2-214ENST00000481194 PNMA6FA0A0J9YX94 578 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 USO1O60763 962 aaKnown RBP21.65■■□□□ 1.06
CCM2-214ENST00000481194 SRGNP10124 158 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 RSBN1LQ6PCB5 846 aaPredicted RBP21.65■■□□□ 1.06
CCM2-214ENST00000481194 BTBD18B2RXH4 712 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 CD2BP2O95400 341 aaKnown RBP21.65■■□□□ 1.06
CCM2-214ENST00000481194 ALAS1P13196 640 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 DPEP1P16444 411 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 LIG1P18858 919 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 SERPINA10Q9UK55 444 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 CYP2D6P10635 497 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 LY9Q9HBG7 655 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 ARHGEF16Q5VV41 709 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 FMNL3Q8IVF7 1028 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 DISP2A7MBM2 1401 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 NLRP12P59046 1061 aa21.65■■□□□ 1.06
CCM2-214ENST00000481194 KIF23Q02241 960 aaPredicted RBP21.65■■□□□ 1.06
CCM2-214ENST00000481194 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.65■■□□□ 1.06
CCM2-214ENST00000481194 ARHGEF35A5YM69 484 aa21.64■■□□□ 1.06
CCM2-214ENST00000481194 SMTNP53814 917 aa21.64■■□□□ 1.06
CCM2-214ENST00000481194 CCNA1P78396 465 aa21.64■■□□□ 1.06
CCM2-214ENST00000481194 POSTNQ15063 836 aa21.64■■□□□ 1.06
CCM2-214ENST00000481194 CYB5R4Q7L1T6 521 aa21.64■■□□□ 1.06
CCM2-214ENST00000481194 NEDD1Q8NHV4 660 aa21.64■■□□□ 1.06
CCM2-214ENST00000481194 GRM4Q14833 912 aa21.64■■□□□ 1.05
CCM2-214ENST00000481194 ERCC4Q92889 916 aaPredicted RBP21.64■■□□□ 1.05
CCM2-214ENST00000481194 DDX25Q9UHL0 483 aaKnown RBP21.64■■□□□ 1.05
CCM2-214ENST00000481194 EXOC7Q9UPT5 735 aa21.64■■□□□ 1.05
CCM2-214ENST00000481194 INF2Q27J81 1249 aa21.64■■□□□ 1.05
CCM2-214ENST00000481194 AK8Q96MA6 479 aa21.64■■□□□ 1.05
CCM2-214ENST00000481194 SLFNL1Q499Z3 407 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 HOMER2Q9NSB8 354 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 SALL3Q9BXA9 1300 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 PPP4CP60510 307 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 PDE4DQ08499 809 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 SLC39A14Q15043 492 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 AGBL3Q8NEM8 1001 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 SALL1Q9NSC2 1324 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 GAS7O60861 476 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 PDE4CQ08493 712 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 CCDC181Q5TID7 509 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 CUEDC2Q9H467 287 aa21.63■■□□□ 1.05
CCM2-214ENST00000481194 OSBPL5Q9H0X9 879 aaPredicted RBP21.62■■□□□ 1.05
CCM2-214ENST00000481194 TAF4BQ92750 862 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 PIGSQ96S52 555 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 RNF181Q9P0P0 153 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 BRPF3Q9ULD4 1205 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 KIF5CO60282 957 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 RCSD1Q6JBY9 416 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 ENAHQ8N8S7 591 aaPredicted RBP21.62■■□□□ 1.05
CCM2-214ENST00000481194 TMEM47Q9BQJ4 181 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 GRIN3BO60391 1043 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 GRM1Q13255 1194 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 KCTD1Q719H9 257 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 PODXL2Q9NZ53 605 aa21.62■■□□□ 1.05
CCM2-214ENST00000481194 GPR75-ASB3A0A0A6YYF3 556 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 CHMP2AO43633 222 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 TBC1D5Q92609 795 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 IQCA1LA6NCM1 817 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 NOP56O00567 594 aaKnown RBP21.61■■□□□ 1.05
CCM2-214ENST00000481194 CALUO43852 315 aaPredicted RBP21.61■■□□□ 1.05
CCM2-214ENST00000481194 HOXA10P31260 410 aaPredicted RBP21.61■■□□□ 1.05
CCM2-214ENST00000481194 EXOSC10Q01780 885 aaKnown RBP21.61■■□□□ 1.05
CCM2-214ENST00000481194 TRMT1LQ7Z2T5 733 aaKnown RBP21.61■■□□□ 1.05
CCM2-214ENST00000481194 IFT74Q96LB3 600 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 AZI2Q9H6S1 392 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 FLT1P17948 1338 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 LARGE1O95461 756 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 FEM1BQ9UK73 627 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 PFKFB1P16118 471 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 HOXA7P31268 230 aaPredicted RBP21.61■■□□□ 1.05
CCM2-214ENST00000481194 TRIML1Q8N9V2 468 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 PLIN2Q99541 437 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 TEKT3Q9BXF9 490 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 ANAPC4Q9UJX5 808 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 ZBTB21Q9ULJ3 1066 aa21.61■■□□□ 1.05
CCM2-214ENST00000481194 GH2P01242 217 aa21.6■■□□□ 1.05
CCM2-214ENST00000481194 TDRD12Q587J7 1177 aaKnown RBP21.6■■□□□ 1.05
CCM2-214ENST00000481194 PSDA5PKW4 1024 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms