RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 TSGA10IPQ3SY00 556 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 IFIT1BQ5T764 474 aaKnown RBP18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 GPRC5AQ8NFJ5 357 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 CHMP4CQ96CF2 233 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 MORF4L1Q9UBU8 362 aa18.31■□□□□ 0.52
CNKSR1-206ENST00000481077 DSG3P32926 999 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 MCM5P33992 734 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 CHST3Q7LGC8 479 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 PNMA1Q8ND90 353 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 DCAF4Q8WV16 495 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 SLF1Q9BQI6 1058 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 USP26Q9BXU7 913 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 FBXO28Q9NVF7 368 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 RBPJLQ9UBG7 517 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 FEM1BQ9UK73 627 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
CNKSR1-206ENST00000481077 ERVK-9P63128 1117 aa18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 ERVK-24P63145 666 aa18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 IKQ13123 557 aaPredicted RBP18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 SEC23AQ15436 765 aa18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 COL13A1Q5TAT6 717 aaPredicted RBP18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 CTU1Q7Z7A3 348 aaKnown RBP18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 MB21D1Q8N884 522 aa18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 PRPF38AQ8NAV1 312 aaKnown RBP18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 NEK1Q96PY6 1258 aa18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 EFCC1Q9HA90 598 aa18.29■□□□□ 0.52
CNKSR1-206ENST00000481077 TMEM232C9JQI7 657 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 PRC1O43663 620 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 ECM2O94769 699 aaPredicted RBP18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 FMNL1O95466 1100 aaPredicted RBP18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 PSMC4P43686 418 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 STAT2P52630 851 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 FCGRTP55899 365 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 ANTXR2P58335 489 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 WTAPQ15007 396 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 TMEM67Q5HYA8 995 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 POTEEQ6S8J3 1075 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 KCTD1Q719H9 257 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 CCAR1Q8IX12 1150 aaKnown RBP18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 CHURC1Q8WUH1 139 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 KCNB2Q92953 911 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 ATG4CQ96DT6 458 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 MTA3Q9BTC8 594 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 ARHGAP39Q9C0H5 1083 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 TRIM17Q9Y577 477 aa18.28■□□□□ 0.52
CNKSR1-206ENST00000481077 PEX10O60683 326 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 GNRH1P01148 92 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 HMGB1P09429 215 aaKnown RBP18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 PDHBP11177 359 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 CCNA1P78396 465 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 FAM160B2Q86V87 743 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 KIFC2Q96AC6 838 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 TMEM87BQ96K49 555 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 TRIM47Q96LD4 638 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 BTBD7Q9P203 1132 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 ADAMTS5Q9UNA0 930 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
CNKSR1-206ENST00000481077 RLFQ13129 1914 aa18.27■□□□□ 0.51
CNKSR1-206ENST00000481077 VWA5AO00534 786 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 PLA2G6O60733 806 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 CNMDO75829 334 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 HOXD10P28358 340 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 Q3C1V9 767 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 ADCK5Q3MIX3 580 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 OTOP1Q7RTM1 612 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 CTDP1Q9Y5B0 961 aaPredicted RBP18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 PARP14Q460N5 1801 aa18.26■□□□□ 0.51
CNKSR1-206ENST00000481077 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 TNPO2O14787 897 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 ZBED4O75132 1171 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 CTGFP29279 349 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 CAP1Q01518 475 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 ZNF543Q08ER8 600 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 PLS1Q14651 629 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 PKN2Q16513 984 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 GPATCH4Q5T3I0 446 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 TMTC2Q8N394 836 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 SPATC1LQ9H0A9 340 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 CWC22Q9HCG8 908 aaKnown RBP18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 GPCPD1Q9NPB8 672 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 A0A0G2JMZ2 1700 aa18.25■□□□□ 0.51
CNKSR1-206ENST00000481077 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
CNKSR1-206ENST00000481077 FDX1P10109 184 aa18.24■□□□□ 0.51
CNKSR1-206ENST00000481077 PSMA5P28066 241 aa18.24■□□□□ 0.51
CNKSR1-206ENST00000481077 MAPK4P31152 587 aa18.24■□□□□ 0.51
CNKSR1-206ENST00000481077 TMEM132BQ14DG7 1078 aa18.24■□□□□ 0.51
CNKSR1-206ENST00000481077 CATIPQ7Z7H3 387 aa18.24■□□□□ 0.51
CNKSR1-206ENST00000481077 COA7Q96BR5 231 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms