RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 JAG2Q9Y219 1238 aa8.31□□□□□ -1.08
VPS50-215ENST00000480943 KNSTRNQ9Y448 316 aa8.31□□□□□ -1.08
VPS50-215ENST00000480943 COL5A3P25940 1745 aaPredicted RBP8.3□□□□□ -1.08
VPS50-215ENST00000480943 EREGO14944 169 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 CYP27B1O15528 508 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 ZBTB7AO95365 584 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 EPHA1P21709 976 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 MAP4P27816 1152 aaKnown RBP8.3□□□□□ -1.08
VPS50-215ENST00000480943 FDX2Q6P4F2 183 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 ATG4DQ86TL0 474 aaPredicted RBP8.3□□□□□ -1.08
VPS50-215ENST00000480943 FAM168AQ92567 244 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 RNF208Q9H0X6 261 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 DZANK1Q9NVP4 752 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 KCNK4Q9NYG8 393 aa8.3□□□□□ -1.08
VPS50-215ENST00000480943 CHD4Q14839 1912 aa8.29□□□□□ -1.08
VPS50-215ENST00000480943 PREPP48147 710 aa8.29□□□□□ -1.08
VPS50-215ENST00000480943 ADAM19Q9H013 955 aa8.29□□□□□ -1.08
VPS50-215ENST00000480943 SH2B1Q9NRF2 756 aaPredicted RBP8.29□□□□□ -1.08
VPS50-215ENST00000480943 BRPF3Q9ULD4 1205 aa8.29□□□□□ -1.08
VPS50-215ENST00000480943 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
VPS50-215ENST00000480943 ZNF831Q5JPB2 1677 aa8.29□□□□□ -1.08
VPS50-215ENST00000480943 IGSF1Q8N6C5 1336 aa8.29□□□□□ -1.08
VPS50-215ENST00000480943 PALLDQ8WX93 1383 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 NFKBIEO00221 500 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 PDE2AO00408 941 aaPredicted RBP8.28□□□□□ -1.08
VPS50-215ENST00000480943 TRPA1O75762 1119 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 EDN3P14138 238 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 RAP1GAPP47736 663 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 CABP4P57796 275 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 CNGB1Q14028 1251 aaPredicted RBP8.28□□□□□ -1.08
VPS50-215ENST00000480943 PLCL1Q15111 1095 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 MPRIPQ6WCQ1 1025 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 HHIPQ96QV1 700 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 CSRNP1Q96S65 589 aa8.28□□□□□ -1.08
VPS50-215ENST00000480943 CCNL1Q9UK58 526 aaPredicted RBP8.28□□□□□ -1.08
VPS50-215ENST00000480943 PLEKHG2Q9H7P9 1386 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 C4AP0C0L4 1744 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 TJP1Q07157 1748 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 H3BRJ5 948 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 FSCN2O14926 492 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 NDUFB5O43674 189 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 PHKG2P15735 406 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
VPS50-215ENST00000480943 IFNL2Q8IZJ0 200 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 TMEM102Q8N9M5 508 aaPredicted RBP8.27□□□□□ -1.09
VPS50-215ENST00000480943 OSMRQ99650 979 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 ZKSCAN3Q9BRR0 538 aa8.27□□□□□ -1.09
VPS50-215ENST00000480943 ARHGAP4P98171 946 aa8.26□□□□□ -1.09
VPS50-215ENST00000480943 TTLL10Q6ZVT0 673 aa8.26□□□□□ -1.09
VPS50-215ENST00000480943 AEBP1Q8IUX7 1158 aa8.26□□□□□ -1.09
VPS50-215ENST00000480943 MTFR1LQ9H019 292 aa8.26□□□□□ -1.09
VPS50-215ENST00000480943 TFCP2L1Q9NZI6 479 aa8.26□□□□□ -1.09
VPS50-215ENST00000480943 MYH14Q7Z406 1995 aaKnown RBP8.26□□□□□ -1.09
VPS50-215ENST00000480943 PNPLA7Q6ZV29 1317 aa8.26□□□□□ -1.09
VPS50-215ENST00000480943 COL3A1P02461 1466 aaPredicted RBP8.26□□□□□ -1.09
VPS50-215ENST00000480943 CICQ96RK0 1608 aaPredicted RBP8.25□□□□□ -1.09
VPS50-215ENST00000480943 SIPA1L3O60292 1781 aaPredicted RBP8.25□□□□□ -1.09
VPS50-215ENST00000480943 ADAMTS7Q9UKP4 1686 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 ECM1Q16610 540 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 ZNF792Q3KQV3 632 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 ZNF530Q6P9A1 599 aaPredicted RBP8.25□□□□□ -1.09
VPS50-215ENST00000480943 PAOXQ6QHF9 649 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 PIGBQ92521 554 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 ZFYVE28Q9HCC9 887 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 SEC31BQ9NQW1 1179 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 TMOD3Q9NYL9 352 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 KDM6AO15550 1401 aaPredicted RBP8.25□□□□□ -1.09
VPS50-215ENST00000480943 DLG5Q8TDM6 1919 aa8.25□□□□□ -1.09
VPS50-215ENST00000480943 CFPP27918 469 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 IL13P35225 146 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 MTHFSP49914 203 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 PLEKHO1Q53GL0 409 aaPredicted RBP8.24□□□□□ -1.09
VPS50-215ENST00000480943 SULT6B1Q6IMI4 303 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 SMARCC1Q92922 1105 aaPredicted RBP8.24□□□□□ -1.09
VPS50-215ENST00000480943 WNT8BQ93098 351 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 LATS2Q9NRM7 1088 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 SOX13Q9UN79 622 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 SLC5A6Q9Y289 635 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 UBR2Q8IWV8 1755 aa8.24□□□□□ -1.09
VPS50-215ENST00000480943 KDRP35968 1356 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 NPC1L1Q9UHC9 1359 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 TM4SF5O14894 197 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 AMOTQ4VCS5 1084 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 LRRC56Q8IYG6 542 aaPredicted RBP8.23□□□□□ -1.09
VPS50-215ENST00000480943 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 UBASH3BQ8TF42 649 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 SLC7A3Q8WY07 619 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 NXPE3Q969Y0 559 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 PPP1R16BQ96T49 567 aa8.23□□□□□ -1.09
VPS50-215ENST00000480943 POLR3DP05423 398 aaPredicted RBP8.22□□□□□ -1.09
VPS50-215ENST00000480943 HMOX1P09601 288 aa8.22□□□□□ -1.09
VPS50-215ENST00000480943 MESP2Q0VG99 397 aa8.22□□□□□ -1.09
VPS50-215ENST00000480943 C1orf141Q5JVX7 400 aa8.22□□□□□ -1.09
VPS50-215ENST00000480943 PEAR1Q5VY43 1037 aaPredicted RBP8.22□□□□□ -1.09
VPS50-215ENST00000480943 COL23A1Q86Y22 540 aaPredicted RBP8.22□□□□□ -1.09
VPS50-215ENST00000480943 CILP2Q8IUL8 1156 aa8.22□□□□□ -1.09
VPS50-215ENST00000480943 ASAP3Q8TDY4 903 aa8.22□□□□□ -1.09
VPS50-215ENST00000480943 FOXD4L4Q8WXT5 416 aaPredicted RBP8.22□□□□□ -1.09
VPS50-215ENST00000480943 KLHDC7BQ96G42 594 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms