RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 IVNS1ABPQ9Y6Y0 642 aa23.86■■□□□ 1.41
VPS36-204ENST00000480923 MOV10L1Q9BXT6 1211 aaKnown RBP23.85■■□□□ 1.41
VPS36-204ENST00000480923 PPP1R9AQ9ULJ8 1098 aa23.85■■□□□ 1.41
VPS36-204ENST00000480923 STX8Q9UNK0 236 aa23.85■■□□□ 1.41
VPS36-204ENST00000480923 NMT2O60551 498 aa23.84■■□□□ 1.41
VPS36-204ENST00000480923 HMGCRP04035 888 aa23.84■■□□□ 1.41
VPS36-204ENST00000480923 FGRP09769 529 aa23.84■■□□□ 1.41
VPS36-204ENST00000480923 RGS2P41220 211 aa23.84■■□□□ 1.41
VPS36-204ENST00000480923 MORN1Q5T089 497 aa23.84■■□□□ 1.41
VPS36-204ENST00000480923 MFSD6Q6ZSS7 791 aa23.84■■□□□ 1.41
VPS36-204ENST00000480923 CENPQQ7L2Z9 268 aaPredicted RBP23.84■■□□□ 1.41
VPS36-204ENST00000480923 UNC93B1Q9H1C4 597 aa23.84■■□□□ 1.41
VPS36-204ENST00000480923 CENPFP49454 3210 aa23.84■■□□□ 1.41
VPS36-204ENST00000480923 ZNF213O14771 459 aa23.83■■□□□ 1.41
VPS36-204ENST00000480923 AKNAD1Q5T1N1 836 aa23.83■■□□□ 1.41
VPS36-204ENST00000480923 SLFN13Q68D06 897 aa23.83■■□□□ 1.41
VPS36-204ENST00000480923 TBC1D10CQ8IV04 446 aa23.83■■□□□ 1.41
VPS36-204ENST00000480923 GMCL1P1Q8NEA9 526 aa23.83■■□□□ 1.41
VPS36-204ENST00000480923 SLF1Q9BQI6 1058 aa23.83■■□□□ 1.41
VPS36-204ENST00000480923 DSCC1Q9BVC3 393 aa23.83■■□□□ 1.41
VPS36-204ENST00000480923 IL17RBQ9NRM6 502 aa23.83■■□□□ 1.41
VPS36-204ENST00000480923 ISY1Q9ULR0 285 aaKnown RBP23.83■■□□□ 1.41
VPS36-204ENST00000480923 SLC15A5A6NIM6 579 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 XRCC5P13010 732 aaKnown RBP23.82■■□□□ 1.4
VPS36-204ENST00000480923 ERCC3P19447 782 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 PTPREP23469 700 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 MAP2K5Q13163 448 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 SHCBP1Q8NEM2 672 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 STAG1Q8WVM7 1258 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 RUFY2Q8WXA3 655 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 USP6NLQ92738 828 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 NBPF3Q9H094 633 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 IL25Q9H293 177 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 RNF41Q9H4P4 317 aaPredicted RBP23.82■■□□□ 1.4
VPS36-204ENST00000480923 ADAMTS5Q9UNA0 930 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 RAD50Q92878 1312 aa23.82■■□□□ 1.4
VPS36-204ENST00000480923 VWA5AO00534 786 aa23.81■■□□□ 1.4
VPS36-204ENST00000480923 PCP11498 1178 aaKnown RBP23.81■■□□□ 1.4
VPS36-204ENST00000480923 ZKSCAN1P17029 563 aaPredicted RBP23.81■■□□□ 1.4
VPS36-204ENST00000480923 CHMLP26374 656 aa23.81■■□□□ 1.4
VPS36-204ENST00000480923 TMEM132BQ14DG7 1078 aa23.81■■□□□ 1.4
VPS36-204ENST00000480923 NCAPG2Q86XI2 1143 aa23.81■■□□□ 1.4
VPS36-204ENST00000480923 NKX2-3Q8TAU0 364 aa23.81■■□□□ 1.4
VPS36-204ENST00000480923 TRIB2Q92519 343 aa23.81■■□□□ 1.4
VPS36-204ENST00000480923 APBA2Q99767 749 aa23.81■■□□□ 1.4
VPS36-204ENST00000480923 CTNNA3Q9UI47 895 aa23.81■■□□□ 1.4
VPS36-204ENST00000480923 A0A0G2JMZ2 1700 aa23.8■■□□□ 1.4
VPS36-204ENST00000480923 GJB1P08034 283 aa23.8■■□□□ 1.4
VPS36-204ENST00000480923 BMP3P12645 472 aa23.8■■□□□ 1.4
VPS36-204ENST00000480923 TRMT44Q8IYL2 757 aaKnown RBP23.8■■□□□ 1.4
VPS36-204ENST00000480923 CHMP4CQ96CF2 233 aa23.8■■□□□ 1.4
VPS36-204ENST00000480923 FEM1BQ9UK73 627 aa23.8■■□□□ 1.4
VPS36-204ENST00000480923 RLFQ13129 1914 aa23.79■■□□□ 1.4
VPS36-204ENST00000480923 RBBP6Q7Z6E9 1792 aaKnown RBP23.79■■□□□ 1.4
VPS36-204ENST00000480923 TRIM32Q13049 653 aa23.79■■□□□ 1.4
VPS36-204ENST00000480923 GRB14Q14449 540 aa23.79■■□□□ 1.4
VPS36-204ENST00000480923 IMMTQ16891 758 aaKnown RBP23.79■■□□□ 1.4
VPS36-204ENST00000480923 PRPF38AQ8NAV1 312 aaKnown RBP23.79■■□□□ 1.4
VPS36-204ENST00000480923 KIFC2Q96AC6 838 aa23.79■■□□□ 1.4
VPS36-204ENST00000480923 MROH8Q9H579 483 aa23.79■■□□□ 1.4
VPS36-204ENST00000480923 CTDP1Q9Y5B0 961 aaPredicted RBP23.79■■□□□ 1.4
VPS36-204ENST00000480923 DOCK3Q8IZD9 2030 aa23.79■■□□□ 1.4
VPS36-204ENST00000480923 PLXNB2O15031 1838 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 SLC25A27O95847 323 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 MCCP23508 829 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 STAT3P40763 770 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 SLC1A4P43007 532 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 GJA8P48165 433 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 CCL14Q16627 93 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 ESR2Q92731 530 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 MTMR7Q9Y216 660 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 NEDD4P46934 1319 aa23.78■■□□□ 1.4
VPS36-204ENST00000480923 STRNO43815 780 aa23.77■■□□□ 1.4
VPS36-204ENST00000480923 ZBED4O75132 1171 aa23.77■■□□□ 1.4
VPS36-204ENST00000480923 IKQ13123 557 aaPredicted RBP23.77■■□□□ 1.4
VPS36-204ENST00000480923 RIOX2Q8IUF8 465 aa23.77■■□□□ 1.4
VPS36-204ENST00000480923 REPS2Q8NFH8 660 aa23.77■■□□□ 1.4
VPS36-204ENST00000480923 U2AF1L4Q8WU68 220 aaKnown RBP23.77■■□□□ 1.4
VPS36-204ENST00000480923 GMCL1Q96IK5 515 aa23.77■■□□□ 1.4
VPS36-204ENST00000480923 CCDC136Q96JN2 1154 aa23.77■■□□□ 1.4
VPS36-204ENST00000480923 TCP11L1Q9NUJ3 509 aa23.77■■□□□ 1.4
VPS36-204ENST00000480923 MYH4Q9Y623 1939 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 TMEM232C9JQI7 657 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 PRKAR2AP13861 404 aaKnown RBP23.76■■□□□ 1.39
VPS36-204ENST00000480923 ADORA2AP29274 412 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 NOVP48745 357 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 DPP9Q86TI2 863 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 SKAP1Q86WV1 359 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 SHISA4Q96DD7 197 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 DEFB118Q96PH6 123 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.76■■□□□ 1.39
VPS36-204ENST00000480923 HMX1Q9NP08 348 aaPredicted RBP23.76■■□□□ 1.39
VPS36-204ENST00000480923 ZNF214Q9UL59 606 aaPredicted RBP23.76■■□□□ 1.39
VPS36-204ENST00000480923 RPTORQ8N122 1335 aa23.76■■□□□ 1.39
VPS36-204ENST00000480923 TOP1P11387 765 aaKnown RBP23.75■■□□□ 1.39
VPS36-204ENST00000480923 COPB2P35606 906 aa23.75■■□□□ 1.39
VPS36-204ENST00000480923 SLC4A3P48751 1232 aa23.75■■□□□ 1.39
VPS36-204ENST00000480923 ERICH6BQ5W0A0 696 aa23.75■■□□□ 1.39
VPS36-204ENST00000480923 PAK6Q9NQU5 681 aaPredicted RBP23.75■■□□□ 1.39
VPS36-204ENST00000480923 KIAA0100Q14667 2235 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms