RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 SLC44A5Q8NCS7 719 aa13.7□□□□□ -0.22
TTC28-206ENST00000480563 TOX2Q96NM4 488 aa13.7□□□□□ -0.22
TTC28-206ENST00000480563 ARHGEF10LQ9HCE6 1279 aa13.7□□□□□ -0.22
TTC28-206ENST00000480563 DCDC2CA8MYV0 355 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 ZNF865P0CJ78 1059 aaPredicted RBP13.69□□□□□ -0.22
TTC28-206ENST00000480563 CYP2D6P10635 497 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 AKR1A1P14550 325 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 ACLYP53396 1101 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 ZNF792Q3KQV3 632 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 SLC9C2Q5TAH2 1124 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 ANKRD33Q7Z3H0 272 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 CLEC10AQ8IUN9 316 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 TSEN34Q9BSV6 310 aaKnown RBP13.69□□□□□ -0.22
TTC28-206ENST00000480563 SH2D4AQ9H788 454 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 VCPKMTQ9H867 229 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 SWAP70Q9UH65 585 aa13.69□□□□□ -0.22
TTC28-206ENST00000480563 DIS3Q9Y2L1 958 aaKnown RBP13.69□□□□□ -0.22
TTC28-206ENST00000480563 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
TTC28-206ENST00000480563 ADAMTS4O75173 837 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 AKR1B1P15121 316 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 PDE6AP16499 860 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
TTC28-206ENST00000480563 ZKSCAN2Q63HK3 967 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 AACSQ86V21 672 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 RIOX2Q8IUF8 465 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 NUP133Q8WUM0 1156 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 SDR42E1Q8WUS8 393 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 LENG1Q96BZ8 264 aaPredicted RBP13.68□□□□□ -0.22
TTC28-206ENST00000480563 DYNLL2Q96FJ2 89 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.68□□□□□ -0.22
TTC28-206ENST00000480563 DCP1AQ9NPI6 582 aaPredicted RBP13.68□□□□□ -0.22
TTC28-206ENST00000480563 STARD7Q9NQZ5 370 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 ADAMTS5Q9UNA0 930 aa13.68□□□□□ -0.22
TTC28-206ENST00000480563 TIMP1P01033 207 aa13.67□□□□□ -0.22
TTC28-206ENST00000480563 STAT3P40763 770 aa13.67□□□□□ -0.22
TTC28-206ENST00000480563 ICA1Q05084 483 aa13.67□□□□□ -0.22
TTC28-206ENST00000480563 LCORLQ8N3X6 602 aa13.67□□□□□ -0.22
TTC28-206ENST00000480563 ATXN2LQ8WWM7 1075 aaKnown RBP13.67□□□□□ -0.22
TTC28-206ENST00000480563 GAS2L1Q99501 681 aaPredicted RBP13.67□□□□□ -0.22
TTC28-206ENST00000480563 FBXO28Q9NVF7 368 aa13.67□□□□□ -0.22
TTC28-206ENST00000480563 CNPY2Q9Y2B0 182 aa13.67□□□□□ -0.22
TTC28-206ENST00000480563 CDH23Q9H251 3354 aa13.67□□□□□ -0.22
TTC28-206ENST00000480563 ZNF532Q9HCE3 1301 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 GRXCR1A8MXD5 290 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 KCNA10Q16322 511 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 MFSD5Q6N075 450 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 CCDC129Q6ZRS4 1044 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 C16orf59Q7L2K0 433 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 KLHDC9Q8NEP7 349 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 CCDC17Q96LX7 622 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 TBX21Q9UL17 535 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 FAM184BQ9ULE4 1060 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 A0A0G2JMZ2 1700 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 ROBO3Q96MS0 1386 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 SMCHD1A6NHR9 2005 aa13.66□□□□□ -0.22
TTC28-206ENST00000480563 SYNRGQ9UMZ2 1314 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 VWA5AO00534 786 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 EEF2P13639 858 aaKnown RBP13.65□□□□□ -0.22
TTC28-206ENST00000480563 COPB2P35606 906 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 PBX2P40425 430 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 PPIGQ13427 754 aaKnown RBP eCLIP13.65□□□□□ -0.22
TTC28-206ENST00000480563 TMEM240Q5SV17 173 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 AKNAD1Q5T1N1 836 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 CCSAPQ6IQ19 270 aaPredicted RBP13.65□□□□□ -0.22
TTC28-206ENST00000480563 CCDC174Q6PII3 467 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 ERC1Q8IUD2 1116 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 PBX4Q9BYU1 374 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 PRDM12Q9H4Q4 367 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 ARMT1Q9H993 441 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 RAPGEFL1Q9UHV5 662 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 ZNF214Q9UL59 606 aaPredicted RBP13.65□□□□□ -0.22
TTC28-206ENST00000480563 EXOC6BQ9Y2D4 811 aa13.65□□□□□ -0.22
TTC28-206ENST00000480563 TCRBV5S4A2TA0A5A2 114 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 PRKAB2O43741 272 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 SNAI1O95863 264 aaPredicted RBP13.64□□□□□ -0.23
TTC28-206ENST00000480563 CDK8P49336 464 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 CDK7P50613 346 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 RASIP1Q5U651 963 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 MSL3Q8N5Y2 521 aaKnown RBP13.64□□□□□ -0.23
TTC28-206ENST00000480563 DDX11Q96FC9 970 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 KANSL2Q9H9L4 492 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 THEGQ9P2T0 379 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 ELP1O95163 1332 aa13.64□□□□□ -0.23
TTC28-206ENST00000480563 CYP2D7A0A087X1C5 515 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 MYADML2A6NDP7 307 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 GOLIM4O00461 696 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 RAD21O60216 631 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 DUSP11O75319 330 aaKnown RBP13.63□□□□□ -0.23
TTC28-206ENST00000480563 CSF2RAP15509 400 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
TTC28-206ENST00000480563 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
TTC28-206ENST00000480563 CCDC85BQ15834 202 aaPredicted RBP13.63□□□□□ -0.23
TTC28-206ENST00000480563 FAM83BQ5T0W9 1011 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms