RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 PRC1O43663 620 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 BMP3P12645 472 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 SLC1A4P43007 532 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 GCLCP48506 637 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-213ENST00000480539 LACTBP83111 547 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-213ENST00000480539 IFIT1BQ5T764 474 aaKnown RBP17.78■□□□□ 0.44
ABCF3-213ENST00000480539 POTEEQ6S8J3 1075 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 KCTD1Q719H9 257 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 DGKHQ86XP1 1220 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 PNMA1Q8ND90 353 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 GTF3C2Q8WUA4 911 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-213ENST00000480539 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 SNX14Q9Y5W7 946 aa17.78■□□□□ 0.44
ABCF3-213ENST00000480539 FRMPD2Q68DX3 1309 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-213ENST00000480539 CNMDO75829 334 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 DSG3P32926 999 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 IKQ13123 557 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-213ENST00000480539 COG2Q14746 738 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.44
ABCF3-213ENST00000480539 SEC23AQ15436 765 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 C8orf34Q49A92 452 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 TMEM67Q5HYA8 995 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 DCAF4Q8WV16 495 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 ERO1AQ96HE7 468 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 TTC14Q96N46 770 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 SLF1Q9BQI6 1058 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 USP26Q9BXU7 913 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 LRRC2Q9BYS8 371 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 SENP2Q9HC62 589 aa17.77■□□□□ 0.44
ABCF3-213ENST00000480539 ERICH2A1L162 156 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 PDHBP11177 359 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 CTGFP29279 349 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 MCM5P33992 734 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 ERVK-9P63128 1117 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 ERVK-24P63145 666 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 KRT32Q14532 448 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 WTAPQ15007 396 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 LBX2Q6XYB7 198 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 KCNB2Q92953 911 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 NEK1Q96PY6 1258 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-213ENST00000480539 BTBD7Q9P203 1132 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 RBPJLQ9UBG7 517 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 MORF4L1Q9UBU8 362 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 PPP1R9AQ9ULJ8 1098 aa17.76■□□□□ 0.43
ABCF3-213ENST00000480539 MYPNQ86TC9 1320 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 EPB41L2O43491 1005 aaKnown RBP17.75■□□□□ 0.43
ABCF3-213ENST00000480539 SEC24BO95487 1268 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 CPA1P15085 419 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 STAT2P52630 851 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 KIF22Q14807 665 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 TSGA10IPQ3SY00 556 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 COL13A1Q5TAT6 717 aaPredicted RBP17.75■□□□□ 0.43
ABCF3-213ENST00000480539 ANKS1AQ92625 1134 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 KIFC2Q96AC6 838 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 TCEANC2Q96MN5 208 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 JAKMIP1Q96N16 626 aaKnown RBP17.75■□□□□ 0.43
ABCF3-213ENST00000480539 GPCPD1Q9NPB8 672 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 FEM1BQ9UK73 627 aa17.75■□□□□ 0.43
ABCF3-213ENST00000480539 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
ABCF3-213ENST00000480539 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-213ENST00000480539 OTOP1Q7RTM1 612 aa17.74■□□□□ 0.43
ABCF3-213ENST00000480539 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
ABCF3-213ENST00000480539 GPRC5AQ8NFJ5 357 aa17.74■□□□□ 0.43
ABCF3-213ENST00000480539 TRIM47Q96LD4 638 aa17.74■□□□□ 0.43
ABCF3-213ENST00000480539 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
ABCF3-213ENST00000480539 HOXC10Q9NYD6 342 aa17.74■□□□□ 0.43
ABCF3-213ENST00000480539 RABGAP1Q9Y3P9 1069 aa17.74■□□□□ 0.43
ABCF3-213ENST00000480539 TRIM17Q9Y577 477 aa17.74■□□□□ 0.43
ABCF3-213ENST00000480539 FMNL1O95466 1100 aaPredicted RBP17.73■□□□□ 0.43
ABCF3-213ENST00000480539 GOLGA8HP0CJ92 632 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 SNHG28P0DPA3 235 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 PSMC4P43686 418 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 ZNF543Q08ER8 600 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 PLS1Q14651 629 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 TTBK2Q6IQ55 1244 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 MB21D1Q8N884 522 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 IGDCC4Q8TDY8 1250 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 PORCNQ9H237 461 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 MGAMO43451 1857 aa17.73■□□□□ 0.43
ABCF3-213ENST00000480539 VWA5AO00534 786 aa17.72■□□□□ 0.43
ABCF3-213ENST00000480539 SLC16A2P36021 539 aa17.72■□□□□ 0.43
ABCF3-213ENST00000480539 FCGRTP55899 365 aa17.72■□□□□ 0.43
ABCF3-213ENST00000480539 Q3C1V9 767 aa17.72■□□□□ 0.43
ABCF3-213ENST00000480539 NFXL1Q6ZNB6 911 aa17.72■□□□□ 0.43
ABCF3-213ENST00000480539 FAM160B2Q86V87 743 aa17.72■□□□□ 0.43
ABCF3-213ENST00000480539 PRPF38AQ8NAV1 312 aaKnown RBP17.72■□□□□ 0.43
ABCF3-213ENST00000480539 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
ABCF3-213ENST00000480539 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
ABCF3-213ENST00000480539 CASTP20810 708 aaKnown RBP17.71■□□□□ 0.43
ABCF3-213ENST00000480539 SNAP25P60880 206 aa17.71■□□□□ 0.43
ABCF3-213ENST00000480539 TMEM132BQ14DG7 1078 aa17.71■□□□□ 0.43
ABCF3-213ENST00000480539 WDR78Q5VTH9 848 aa17.71■□□□□ 0.43
ABCF3-213ENST00000480539 REPS2Q8NFH8 660 aa17.71■□□□□ 0.43
ABCF3-213ENST00000480539 CHURC1Q8WUH1 139 aa17.71■□□□□ 0.43
ABCF3-213ENST00000480539 MYL10Q9BUA6 226 aa17.71■□□□□ 0.43
ABCF3-213ENST00000480539 SPATC1LQ9H0A9 340 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms