RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 PLIN4Q96Q06 1357 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 hCG_1642624A0A1W2PR95 340 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 IRF6O14896 467 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 PLEKHA8P1O95397 391 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 SLC16A2P36021 539 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 SLC1A4P43007 532 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 HMGCS2P54868 508 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 ST3GAL1Q11201 340 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 IKQ13123 557 aaPredicted RBP7.49□□□□□ -1.21
HERC4-210ENST00000480158 PDAP1Q13442 181 aaKnown RBP7.49□□□□□ -1.21
HERC4-210ENST00000480158 SLFN13Q68D06 897 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 FBXL16Q8N461 479 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 ZNF280CQ8ND82 737 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 PHKBQ93100 1093 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 OPTNQ96CV9 577 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 ZNF274Q96GC6 653 aaPredicted RBP7.49□□□□□ -1.21
HERC4-210ENST00000480158 UBA5Q9GZZ9 404 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 VAT1LQ9HCJ6 419 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 USP17L10C9JJH3 530 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 CPLX1O14810 134 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 DHX16O60231 1041 aaKnown RBP7.49□□□□□ -1.21
HERC4-210ENST00000480158 PFKFB2O60825 505 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 NDUFB10O96000 172 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 PDHBP11177 359 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 FOSBP53539 338 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 RTN1Q16799 776 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 LDLRAD1Q5T700 205 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 TTBK2Q6IQ55 1244 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 NBPF11Q86T75 865 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 CTCFLQ8NI51 663 aaPredicted RBP7.49□□□□□ -1.21
HERC4-210ENST00000480158 ANKS1AQ92625 1134 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 GTF3C6Q969F1 213 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 ZSCAN31Q96LW9 406 aaPredicted RBP7.49□□□□□ -1.21
HERC4-210ENST00000480158 MTA3Q9BTC8 594 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 TMX2Q9Y320 296 aa7.49□□□□□ -1.21
HERC4-210ENST00000480158 PASKQ96RG2 1323 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 JAK2O60674 1132 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 PARP1P09874 1014 aaKnown RBP7.48□□□□□ -1.21
HERC4-210ENST00000480158 NOVP48745 357 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 EVCP57679 992 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 SNAP25P60880 206 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 MAP3K11Q16584 847 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 FAM83BQ5T0W9 1011 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 ERO1BQ86YB8 467 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 RBM46Q8TBY0 533 aaKnown RBP7.48□□□□□ -1.21
HERC4-210ENST00000480158 SP7Q8TDD2 431 aaPredicted RBP7.48□□□□□ -1.21
HERC4-210ENST00000480158 MKL1Q969V6 931 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 AS3MTQ9HBK9 375 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 GOPCQ9HD26 462 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 SH2B1Q9NRF2 756 aaPredicted RBP7.48□□□□□ -1.21
HERC4-210ENST00000480158 FAM217BQ9NTX9 383 aaPredicted RBP7.48□□□□□ -1.21
HERC4-210ENST00000480158 AFG3L2Q9Y4W6 797 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 KLRF2D3W0D1 207 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 DDAH1O94760 285 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 GJA5P36382 358 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 NT5C2P49902 561 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 ZNF157P51786 506 aaPredicted RBP7.48□□□□□ -1.21
HERC4-210ENST00000480158 BACE1P56817 501 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 HTRA3P83110 453 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 NOL9Q5SY16 702 aaKnown RBP7.48□□□□□ -1.21
HERC4-210ENST00000480158 SAPCD2Q86UD0 394 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 IPO9Q96P70 1041 aaKnown RBP7.48□□□□□ -1.21
HERC4-210ENST00000480158 SH2D4AQ9H788 454 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 VCPKMTQ9H867 229 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 EMILIN3Q9NT22 766 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 MAD2L2Q9UI95 211 aa7.48□□□□□ -1.21
HERC4-210ENST00000480158 SPDYE5A6NIY4 337 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 TMEM232C9JQI7 657 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 CTDNEP1O95476 244 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 CALM1P0DP23 149 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 CALM2P0DP24 149 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 CALM3P0DP25 149 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 FKBP1BP68106 108 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 PPP4R3BQ5MIZ7 849 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 GADL1Q6ZQY3 521 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 HOMER1Q86YM7 354 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 SRBD1Q8N5C6 995 aaKnown RBP7.47□□□□□ -1.21
HERC4-210ENST00000480158 SLC26A6Q9BXS9 759 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 TANGO6Q9C0B7 1094 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 FBXO28Q9NVF7 368 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 CEP350Q5VT06 3117 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 PTPDC1A2A3K4 754 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 TMEM88BA6NKF7 163 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 BMP3P12645 472 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 VCAM1P19320 739 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 KIF5BP33176 963 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 PPATQ06203 517 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 ZNF543Q08ER8 600 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 GRM4Q14833 912 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 GMCL1P1Q8NEA9 526 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 KIFC2Q96AC6 838 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 WDR18Q9BV38 432 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 KIAA1683Q9H0B3 1180 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 TMOD4Q9NZQ9 345 aa7.47□□□□□ -1.21
HERC4-210ENST00000480158 V9GY48 417 aaPredicted RBP7.47□□□□□ -1.21
HERC4-210ENST00000480158 CCDC196A0A1B0GTZ2 297 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 PALM3A6NDB9 673 aaPredicted RBP7.46□□□□□ -1.22
HERC4-210ENST00000480158 GJB2P29033 226 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 TREML2Q5T2D2 321 aa7.46□□□□□ -1.22
HERC4-210ENST00000480158 SMYD5Q6GMV2 418 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms