RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 E7EWF7 191 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 DDAH1O94760 285 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 XRCC5P13010 732 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 FAM173BQ6P4H8 233 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 ARHGEF18Q6ZSZ5 1173 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC105Q8IYK2 499 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 FANCBQ8NB91 859 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 STAG1Q8WVM7 1258 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 HAUS1Q96CS2 278 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 TAB2Q9NYJ8 693 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 TNNQ9UQP3 1299 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 E7EVH7 732 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 PDE8AO60658 829 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 LDHBP07195 334 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 PNMA6AP0CW24 399 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 PDE6CP51160 858 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 IL9RQ01113 521 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 NBPF5PQ86XG9 351 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 LINC00301Q8NCQ3 95 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 ARPP21Q9UBL0 812 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 MYO1CO00159 1063 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 TAF5LO75529 589 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 GCP02774 474 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 GSPT1P15170 499 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 MCM7P33993 719 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 CCT6AP40227 531 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 NELFBQ8WX92 580 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 HOOK2Q96ED9 719 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 FNBP1Q96RU3 617 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 COL4A3BPQ9Y5P4 624 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 MIF4GDA9UHW6 222 aaKnown RBP6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 KCNJ18B7U540 433 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 STMN1P16949 149 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 KCNJ12Q14500 433 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 FAM26FQ5R3K3 315 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC25Q86WR0 208 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 GPT2Q8TD30 523 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 OTUD7AQ8TE49 926 aaPredicted RBP6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 SNX29Q8TEQ0 813 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 HAUS7Q99871 368 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 TXLNGQ9NUQ3 528 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 ODF2LQ9ULJ1 636 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 USP19O94966 1318 aa6.77□□□□□ -1.32
PRPF4B-205ENST00000480058 IPO5O00410 1097 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 GPTP24298 496 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 HSP90AA4PQ58FG1 418 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ARHGAP18Q8N392 663 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ZNF579Q8NAF0 562 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 NCAPGQ9BPX3 1015 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ZC3H12CQ9C0D7 883 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 VAT1LQ9HCJ6 419 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ANXA1P04083 346 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 CCNE1P24864 410 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 APLFQ8IW19 511 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 OGFOD1Q8N543 542 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 HAUS8Q9BT25 410 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 DDX23Q9BUQ8 820 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 FANCLQ9NW38 375 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 MORC2Q9Y6X9 1032 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 CPSF1Q10570 1443 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 PGRMC1O00264 195 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 CIAO1O76071 339 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 LMNAP02545 664 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 IL2RBP14784 551 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 COPB1P53618 953 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 PSMD2Q13200 908 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 LETM2Q2VYF4 491 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 TADA2BQ86TJ2 420 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 DRC3Q9H069 523 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 TMX1Q9H3N1 280 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 GIPC1O14908 333 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 HNRNPCL1O60812 293 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ADCY7P51828 1080 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ASPHQ12797 758 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 RPUSD2Q8IZ73 545 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 GFM2Q969S9 779 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 LSG1Q9H089 658 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 INTS9Q9NV88 658 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 PSD3Q9NYI0 1048 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ADAM21Q9UKJ8 722 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ZMYM6O95789 1325 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ZNF189O75820 626 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 HSPA8P11142 646 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 LMNB1P20700 586 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 LRMPQ12912 555 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ZNF174Q15697 407 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 MAN2A1Q16706 1144 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 CWF19L2Q2TBE0 894 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 PPP4R3CPQ6ZMV5 832 aa6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 ARHGEF2Q92974 986 aaKnown RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 EAF2Q96CJ1 260 aaPredicted RBP6.77□□□□□ -1.33
PRPF4B-205ENST00000480058 HOXC9P31274 260 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 EIF4A1P60842 406 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 ARID5AQ03989 594 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 PDZD4Q76G19 769 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 C2CD5Q86YS7 1000 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms