RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
CHD6-208ENST00000480022 GOLGA6BA6NDN3 693 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 CMA1P23946 247 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 YTHDF3Q7Z739 585 aaKnown RBP12.22□□□□□ -0.45
CHD6-208ENST00000480022 POLR3EQ9NVU0 708 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 MYO6Q9UM54 1294 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 CTSWP56202 376 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 CCDC40Q4G0X9 1142 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 SH3GL2Q99962 352 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 FSD1Q9BTV5 496 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 VCPKMTQ9H867 229 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
CHD6-208ENST00000480022 ANKRD33BA6NCL7 494 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 CDR1P51861 262 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 CCNHP51946 323 aaPredicted RBP12.21□□□□□ -0.45
CHD6-208ENST00000480022 ACTN3Q08043 901 aaPredicted RBP12.21□□□□□ -0.45
CHD6-208ENST00000480022 RABL6Q3YEC7 729 aaPredicted RBP12.21□□□□□ -0.45
CHD6-208ENST00000480022 HSP90AA4PQ58FG1 418 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 NCAPH2Q6IBW4 605 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 LMBR1LQ6UX01 489 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 RASGRP2Q7LDG7 609 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 NLRP3Q96P20 1036 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 SEC62Q99442 399 aaKnown RBP12.21□□□□□ -0.45
CHD6-208ENST00000480022 CDC5LQ99459 802 aaKnown RBP12.21□□□□□ -0.45
CHD6-208ENST00000480022 CENPHQ9H3R5 247 aa12.21□□□□□ -0.45
CHD6-208ENST00000480022 TTF2Q9UNY4 1162 aaKnown RBP12.21□□□□□ -0.45
CHD6-208ENST00000480022 GOLGA8KD6RF30 607 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 RASSF9O75901 435 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 CSF1RP07333 972 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 EZRP15311 586 aaKnown RBP12.21□□□□□ -0.46
CHD6-208ENST00000480022 IBSPP21815 317 aaPredicted RBP12.21□□□□□ -0.46
CHD6-208ENST00000480022 ZNF589Q86UQ0 364 aaPredicted RBP12.21□□□□□ -0.46
CHD6-208ENST00000480022 KCTD17Q8N5Z5 321 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 ARMC2Q8NEN0 867 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 GDAP1L1Q96MZ0 367 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 CCDC85AQ96PX6 553 aaPredicted RBP12.21□□□□□ -0.46
CHD6-208ENST00000480022 SELENOOQ9BVL4 669 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 LRRC2Q9BYS8 371 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 MYO1AQ9UBC5 1043 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 C10orf71Q711Q0 1435 aa12.21□□□□□ -0.46
CHD6-208ENST00000480022 TARSL2A2RTX5 802 aaKnown RBP12.2□□□□□ -0.46
CHD6-208ENST00000480022 KLRG2A4D1S0 409 aaPredicted RBP12.2□□□□□ -0.46
CHD6-208ENST00000480022 TAF5LO75529 589 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 SYKP43405 635 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 AP1ARQ63HQ0 302 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 CEP57Q86XR8 500 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 ZNF483Q8TF39 744 aaPredicted RBP12.2□□□□□ -0.46
CHD6-208ENST00000480022 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
CHD6-208ENST00000480022 AMPD2Q01433 879 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 ADCY2Q08462 1091 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
CHD6-208ENST00000480022 SNCBQ16143 134 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 NBPF9Q3BBW0 867 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 CCDC50Q8IVM0 306 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 SALL1Q9NSC2 1324 aa12.2□□□□□ -0.46
CHD6-208ENST00000480022 SPATS2LQ9NUQ6 558 aaKnown RBP12.2□□□□□ -0.46
CHD6-208ENST00000480022 HOOK1Q9UJC3 728 aaKnown RBP12.2□□□□□ -0.46
CHD6-208ENST00000480022 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
CHD6-208ENST00000480022 SKOR1P84550 965 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 PNOCQ13519 176 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.19□□□□□ -0.46
CHD6-208ENST00000480022 AACSQ86V21 672 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 SH3GL3Q99963 347 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 PAGR1Q9BTK6 254 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 GREM2Q9H772 168 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 MTMR7Q9Y216 660 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 DDX60Q8IY21 1712 aaKnown RBP12.19□□□□□ -0.46
CHD6-208ENST00000480022 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
CHD6-208ENST00000480022 PDE6BP35913 854 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 SLC40A1Q9NP59 571 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 ETAA1Q9NY74 926 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 FRMD3A2A2Y4 597 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 ZNF18P17022 549 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 CCDC152Q4G0S7 254 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 RNF187Q5TA31 235 aaPredicted RBP12.19□□□□□ -0.46
CHD6-208ENST00000480022 CCDC13Q8IYE1 715 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 MAGEC3Q8TD91 643 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 TATDN2Q93075 761 aa12.19□□□□□ -0.46
CHD6-208ENST00000480022 MROH7-TTC4A0A0A0MT08 1334 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 OPA1O60313 960 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 POLR3DP05423 398 aaPredicted RBP12.18□□□□□ -0.46
CHD6-208ENST00000480022 ICA1Q05084 483 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 PDE4BQ07343 736 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 NAA25Q14CX7 972 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 TLDC1Q6P9B6 456 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 SYNE3Q6ZMZ3 975 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 ATP6V0A4Q9HBG4 840 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 NFE2L3Q9Y4A8 694 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 GCKP35557 465 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 CCNI2Q6ZMN8 369 aaPredicted RBP12.18□□□□□ -0.46
CHD6-208ENST00000480022 NCOA5Q9HCD5 579 aaKnown RBP12.18□□□□□ -0.46
CHD6-208ENST00000480022 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms