RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
CCDC58-205ENST00000479899 SENP6Q9GZR1 1112 aaPredicted RBP13.14□□□□□ -0.31
CCDC58-205ENST00000479899 PIH1D3Q9NQM4 214 aaKnown RBP13.14□□□□□ -0.31
CCDC58-205ENST00000479899 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
CCDC58-205ENST00000479899 PPP4CP60510 307 aa13.13□□□□□ -0.31
CCDC58-205ENST00000479899 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
CCDC58-205ENST00000479899 ATF7IPQ6VMQ6 1270 aa13.13□□□□□ -0.31
CCDC58-205ENST00000479899 LBHD1Q9BQE6 289 aaPredicted RBP13.13□□□□□ -0.31
CCDC58-205ENST00000479899 C1orf115Q9H7X2 142 aa13.13□□□□□ -0.31
CCDC58-205ENST00000479899 TLR7Q9NYK1 1049 aaKnown RBP13.13□□□□□ -0.31
CCDC58-205ENST00000479899 FLRT1Q9NZU1 646 aa13.13□□□□□ -0.31
CCDC58-205ENST00000479899 LTBP2Q14767 1821 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L15C9J2P7 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L13C9JLJ4 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L11C9JVI0 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L18D6R9N7 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L22D6RA61 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L17D6RBQ6 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L19D6RCP7 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L20D6RJB6 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 CNMDO75829 334 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 IDH1O75874 414 aaKnown RBP13.12□□□□□ -0.31
CCDC58-205ENST00000479899 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
CCDC58-205ENST00000479899 CCNA1P78396 465 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 USP17L24Q0WX57 530 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
CCDC58-205ENST00000479899 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 RNF166Q96A37 237 aaPredicted RBP13.12□□□□□ -0.31
CCDC58-205ENST00000479899 EDC3Q96F86 508 aaKnown RBP13.12□□□□□ -0.31
CCDC58-205ENST00000479899 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
CCDC58-205ENST00000479899 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 RABGAP1Q9Y3P9 1069 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 IVNS1ABPQ9Y6Y0 642 aa13.12□□□□□ -0.31
CCDC58-205ENST00000479899 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
CCDC58-205ENST00000479899 BCAR3O75815 825 aa13.11□□□□□ -0.31
CCDC58-205ENST00000479899 VCAM1P19320 739 aa13.11□□□□□ -0.31
CCDC58-205ENST00000479899 CYP2C19P33261 490 aa13.11□□□□□ -0.31
CCDC58-205ENST00000479899 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
CCDC58-205ENST00000479899 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
CCDC58-205ENST00000479899 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
CCDC58-205ENST00000479899 MAGEB6Q8N7X4 407 aa13.11□□□□□ -0.31
CCDC58-205ENST00000479899 WNT2BQ93097 391 aa13.11□□□□□ -0.31
CCDC58-205ENST00000479899 PRKAG2Q9UGJ0 569 aa13.11□□□□□ -0.31
CCDC58-205ENST00000479899 DDX20Q9UHI6 824 aaKnown RBP13.11□□□□□ -0.31
CCDC58-205ENST00000479899 IPO8O15397 1037 aaKnown RBP13.1□□□□□ -0.31
CCDC58-205ENST00000479899 ABCB5Q2M3G0 1257 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 METTL3Q86U44 580 aaKnown RBP13.1□□□□□ -0.31
CCDC58-205ENST00000479899 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC58-205ENST00000479899 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 ANKK1Q8NFD2 765 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 NPLOC4Q8TAT6 608 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 C12orf42Q96LP6 360 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 GUCD1Q96NT3 240 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 RPAP3Q9H6T3 665 aaPredicted RBP13.1□□□□□ -0.31
CCDC58-205ENST00000479899 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
CCDC58-205ENST00000479899 BTBD7Q9P203 1132 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 SERPINB13Q9UIV8 391 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 DBNLQ9UJU6 430 aaKnown RBP13.1□□□□□ -0.31
CCDC58-205ENST00000479899 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
CCDC58-205ENST00000479899 MPHOSPH10O00566 681 aaKnown RBP13.09□□□□□ -0.31
CCDC58-205ENST00000479899 USP14P54578 494 aa13.09□□□□□ -0.31
CCDC58-205ENST00000479899 RTP1P59025 263 aa13.09□□□□□ -0.31
CCDC58-205ENST00000479899 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
CCDC58-205ENST00000479899 GJC2Q5T442 439 aaPredicted RBP13.09□□□□□ -0.31
CCDC58-205ENST00000479899 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
CCDC58-205ENST00000479899 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
CCDC58-205ENST00000479899 LPAR1Q92633 364 aa13.09□□□□□ -0.31
CCDC58-205ENST00000479899 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
CCDC58-205ENST00000479899 CABP5Q9NP86 173 aa13.09□□□□□ -0.31
CCDC58-205ENST00000479899 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
CCDC58-205ENST00000479899 SLC15A5A6NIM6 579 aa13.08□□□□□ -0.32
CCDC58-205ENST00000479899 DNM1LO00429 736 aa13.08□□□□□ -0.32
CCDC58-205ENST00000479899 DNAJB2P25686 324 aa13.08□□□□□ -0.32
CCDC58-205ENST00000479899 GRB14Q14449 540 aa13.08□□□□□ -0.32
CCDC58-205ENST00000479899 TRPV1Q8NER1 839 aa13.08□□□□□ -0.32
CCDC58-205ENST00000479899 KCTD12Q96CX2 325 aaKnown RBP13.08□□□□□ -0.32
CCDC58-205ENST00000479899 KIAA1683Q9H0B3 1180 aa13.08□□□□□ -0.32
CCDC58-205ENST00000479899 ZNF236Q9UL36 1845 aa13.08□□□□□ -0.32
CCDC58-205ENST00000479899 A0A0G2JMZ2 1700 aa13.08□□□□□ -0.32
CCDC58-205ENST00000479899 MSCO60682 206 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 TATDN1Q6P1N9 297 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 DPP9Q86TI2 863 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 TTC6Q86TZ1 520 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 TANGO6Q9C0B7 1094 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 EHD4Q9H223 541 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 PRUNE2Q8WUY3 3088 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 RLFQ13129 1914 aa13.07□□□□□ -0.32
CCDC58-205ENST00000479899 MYH8P13535 1937 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 RCCD1A6NED2 376 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 KBTBD13C9JR72 458 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
CCDC58-205ENST00000479899 CYBAP13498 195 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 ADORA2AP29274 412 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 SHMT1P34896 483 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 PLCD1P51178 756 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 MAP3K12Q12852 859 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 PLS1Q14651 629 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms