RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TMX3Q96JJ7 454 aa14.63□□□□□ -0.07
TRAPPC12-218ENST00000479897 SLKQ9H2G2 1235 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC12-218ENST00000479897 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
TRAPPC12-218ENST00000479897 MAD2L2Q9UI95 211 aa14.63□□□□□ -0.07
TRAPPC12-218ENST00000479897 ABT1Q9ULW3 272 aaKnown RBP14.63□□□□□ -0.07
TRAPPC12-218ENST00000479897 RBM19Q9Y4C8 960 aaKnown RBP14.63□□□□□ -0.07
TRAPPC12-218ENST00000479897 FAM155AB1AL88 458 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 PARP1P09874 1014 aaKnown RBP14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 BMP3P12645 472 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 SMARCA1P28370 1054 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 ANP32AP39687 249 aaKnown RBP14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 GNAQP50148 359 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 ZNF157P51786 506 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 ST3GAL1Q11201 340 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 SCRN1Q12765 414 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 MOGSQ13724 837 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 RTN1Q16799 776 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 BTNL9Q6UXG8 535 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 NUP133Q8WUM0 1156 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 MS4A4AQ96JQ5 239 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 LZTS2Q9BRK4 669 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 FAM217BQ9NTX9 383 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 TMOD4Q9NZQ9 345 aa14.62□□□□□ -0.07
TRAPPC12-218ENST00000479897 TESPA1A2RU30 521 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 DHX16O60231 1041 aaKnown RBP14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 CETPP11597 493 aa14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 RXRAP19793 462 aa14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 CDC27P30260 824 aa14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 CUL4AQ13619 759 aa14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 ZYXQ15942 572 aaKnown RBP14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 TMTC3Q6ZXV5 915 aa14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 FASTKD5Q7L8L6 764 aaKnown RBP14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 SPZ1Q9BXG8 430 aa14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 MYPNQ86TC9 1320 aa14.61□□□□□ -0.07
TRAPPC12-218ENST00000479897 IFNAR1P17181 557 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 HOXA7P31268 230 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 FUT2Q10981 343 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 BECN1Q14457 450 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 NTRK3Q16288 839 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 CCDC96Q2M329 555 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 SPICE1Q8N0Z3 855 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 STAG2Q8N3U4 1231 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 LLPHQ9BRT6 129 aaKnown RBP14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 NAP1L2Q9ULW6 460 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 AGTPBP1Q9UPW5 1226 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 SLC45A1Q9Y2W3 748 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 CNTNAP5Q8WYK1 1306 aa14.6□□□□□ -0.07
TRAPPC12-218ENST00000479897 MANSC4A6NHS7 340 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 KLRF2D3W0D1 207 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 CDKL5O76039 1030 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 STAT2P52630 851 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 STK3Q13188 491 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 DGKZQ13574 1117 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 CPLX2Q6PUV4 134 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 KCTD1Q719H9 257 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 FAM160B2Q86V87 743 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 RAB11FIP4Q86YS3 637 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 CCDC144CPQ8IYA2 1237 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 INTS4Q96HW7 963 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 RPAP3Q9H6T3 665 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 RIOX1Q9H6W3 641 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 NCOA5Q9HCD5 579 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 ZCCHC17Q9NP64 241 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 FEM1BQ9UK73 627 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 STK36Q9NRP7 1315 aa14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 COL11A1P12107 1806 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC12-218ENST00000479897 CCL15-CCL14A0A0B4J2E2 113 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L15C9J2P7 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L13C9JLJ4 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 TMEM232C9JQI7 657 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L11C9JVI0 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L18D6R9N7 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L22D6RA61 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L17D6RBQ6 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L19D6RCP7 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L20D6RJB6 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 RAD21O60216 631 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 PLEKHA8P1O95397 391 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 GOLGA8HP0CJ92 632 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 ADD1P35611 737 aaKnown RBP14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 CCT2P78371 535 aaKnown RBP14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 USP17L24Q0WX57 530 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 NOGQ13253 232 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 PABPC4Q13310 644 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 CCL15Q16663 113 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 DEFB115Q30KQ5 88 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 TREML2Q5T2D2 321 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 GPAT2Q6NUI2 795 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 CATSPERGQ6ZRH7 1159 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 ANKRD23Q86SG2 305 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 CCDC83Q8IWF9 413 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 NECAB1Q8N987 351 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 CHURC1Q8WUH1 139 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 BRI3BPQ8WY22 251 aa14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 RNF26Q9BY78 433 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 RBM27Q9P2N5 1060 aaKnown RBP14.58□□□□□ -0.08
TRAPPC12-218ENST00000479897 MTMR7Q9Y216 660 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms