RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MROH8Q9H579 483 aa17.11■□□□□ 0.33
ATG4B-218ENST00000479554 ZNF287Q9HBT7 754 aa17.11■□□□□ 0.33
ATG4B-218ENST00000479554 FRMPD3Q5JV73 1810 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 PATL2C9JE40 543 aaKnown RBP17.1■□□□□ 0.33
ATG4B-218ENST00000479554 TMEM132BQ14DG7 1078 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 LHX8Q68G74 356 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 C7orf61Q8IZ16 206 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 IFNL3Q8IZI9 196 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 FBXO28Q9NVF7 368 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
ATG4B-218ENST00000479554 PPP1R9AQ9ULJ8 1098 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 SALL3Q9BXA9 1300 aa17.1■□□□□ 0.33
ATG4B-218ENST00000479554 DNAH12Q6ZR08 3092 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 PRDM1O75626 825 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 SLC25A27O95847 323 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 CNGA1P29973 690 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 CYP2C19P33261 490 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 ZMYM1Q5SVZ6 1142 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-218ENST00000479554 ABRAQ8N0Z2 381 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 NAPBQ9H115 298 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 SLC5A4Q9NY91 659 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 NYAP2Q9P242 653 aa17.09■□□□□ 0.33
ATG4B-218ENST00000479554 COL11A1P12107 1806 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-218ENST00000479554 PFASO15067 1338 aa17.08■□□□□ 0.32
ATG4B-218ENST00000479554 MSCO60682 206 aa17.08■□□□□ 0.32
ATG4B-218ENST00000479554 HDAC1Q13547 482 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-218ENST00000479554 OLFML2BQ68BL8 750 aa17.08■□□□□ 0.32
ATG4B-218ENST00000479554 DDX20Q9UHI6 824 aaKnown RBP17.08■□□□□ 0.32
ATG4B-218ENST00000479554 ADAMTS5Q9UNA0 930 aa17.08■□□□□ 0.32
ATG4B-218ENST00000479554 TRIOBPQ9H2D6 2365 aa17.08■□□□□ 0.32
ATG4B-218ENST00000479554 IGKV6D-41A0A0C4DH26 115 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 F5H6K3 240 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 VWA5AO00534 786 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 COBLO75128 1261 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 NDUFB10O96000 172 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 SLC3A2P08195 630 aaKnown RBP17.07■□□□□ 0.32
ATG4B-218ENST00000479554 COL6A1P12109 1028 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 FCER1AP12319 257 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 CYBAP13498 195 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 PDE4BQ07343 736 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 KLRC3Q07444 240 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 RIOX2Q8IUF8 465 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 NUP88Q99567 741 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-218ENST00000479554 PRO3102Q9H379 93 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 CLIP2Q9UDT6 1046 aa17.07■□□□□ 0.32
ATG4B-218ENST00000479554 PLIN4Q96Q06 1357 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 MYH4Q9Y623 1939 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 IGHA2P01877 340 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 COPB2P35606 906 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 TRPV1Q8NER1 839 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 EVI5LQ96CN4 794 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 CEP95Q96GE4 821 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 MMP19Q99542 508 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
ATG4B-218ENST00000479554 TSPY3P0CV98 308 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 TSPY8P0CW00 308 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 STAT3P40763 770 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 PDE1AP54750 535 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 PPARAQ07869 468 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 CCDC129Q6ZRS4 1044 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 REPS2Q8NFH8 660 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 MAML3Q96JK9 1138 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 MTMR4Q9NYA4 1195 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 STAP2Q9UGK3 403 aa17.05■□□□□ 0.32
ATG4B-218ENST00000479554 ZNF214Q9UL59 606 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-218ENST00000479554 ZMYND8Q9ULU4 1186 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-218ENST00000479554 TTLL1O95922 423 aa17.04■□□□□ 0.32
ATG4B-218ENST00000479554 AAMPQ13685 434 aa17.04■□□□□ 0.32
ATG4B-218ENST00000479554 KCTD2Q14681 263 aa17.04■□□□□ 0.32
ATG4B-218ENST00000479554 NEDD1Q8NHV4 660 aa17.04■□□□□ 0.32
ATG4B-218ENST00000479554 SYNPO2Q9UMS6 1093 aa17.04■□□□□ 0.32
ATG4B-218ENST00000479554 SZT2Q5T011 3432 aa17.04■□□□□ 0.32
ATG4B-218ENST00000479554 A0A1W2PPC1 479 aa17.03■□□□□ 0.32
ATG4B-218ENST00000479554 DNM1LO00429 736 aa17.03■□□□□ 0.32
ATG4B-218ENST00000479554 SEPT4O43236 478 aa17.03■□□□□ 0.32
ATG4B-218ENST00000479554 SYN1P17600 705 aa17.03■□□□□ 0.32
ATG4B-218ENST00000479554 TFAP4Q01664 338 aa17.03■□□□□ 0.32
ATG4B-218ENST00000479554 FAM47AQ5JRC9 791 aa17.03■□□□□ 0.32
ATG4B-218ENST00000479554 SNRNP48Q6IEG0 339 aaKnown RBP17.03■□□□□ 0.32
ATG4B-218ENST00000479554 LRRC47Q8N1G4 583 aaKnown RBP17.03■□□□□ 0.32
ATG4B-218ENST00000479554 PRPF38AQ8NAV1 312 aaKnown RBP17.03■□□□□ 0.32
ATG4B-218ENST00000479554 MKL1Q969V6 931 aa17.03■□□□□ 0.32
ATG4B-218ENST00000479554 TEX13BQ9BXU2 312 aa17.03■□□□□ 0.32
ATG4B-218ENST00000479554 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-218ENST00000479554 FOXP2O15409 715 aa17.02■□□□□ 0.32
ATG4B-218ENST00000479554 PGK2P07205 417 aa17.02■□□□□ 0.32
ATG4B-218ENST00000479554 LRRC26Q2I0M4 334 aa17.02■□□□□ 0.32
ATG4B-218ENST00000479554 GMCL1P1Q8NEA9 526 aa17.02■□□□□ 0.32
ATG4B-218ENST00000479554 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
ATG4B-218ENST00000479554 ZBED4O75132 1171 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 CTDSPL2Q05D32 466 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 PPP4R3BQ5MIZ7 849 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 PRAMEF19Q5SWL8 479 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 ANO1Q5XXA6 986 aa17.01■□□□□ 0.31
ATG4B-218ENST00000479554 SLFN13Q68D06 897 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms