RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 CWF19L2Q2TBE0 894 aaKnown RBP5.34□□□□□ -1.55
NF1-209ENST00000479536 SFRP5Q5T4F7 317 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 SDE2Q6IQ49 451 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 CCDC81Q6ZN84 652 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 GRIN3AQ8TCU5 1115 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 HNRNPLLQ8WVV9 542 aaKnown RBP5.34□□□□□ -1.55
NF1-209ENST00000479536 UBE2FQ969M7 185 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 MKL1Q969V6 931 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 SHDQ96IW2 340 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 TRIM55Q9BYV6 548 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 SIRPGQ9P1W8 387 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 ZSWIM5Q9P217 1185 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 PRKAG3Q9UGI9 489 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 PPT2Q9UMR5 302 aa5.34□□□□□ -1.55
NF1-209ENST00000479536 DNAJC25-GNG10A0A024R161 153 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 ANKRD62A6NC57 917 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 U2SURPO15042 1029 aaKnown RBP5.33□□□□□ -1.56
NF1-209ENST00000479536 FANCGO15287 622 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 CILPO75339 1184 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 SLITRK5O94991 958 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 SYN1P17600 705 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 MCM4P33991 863 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 HK2P52789 917 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 ZNF252P-AS1Q0IIN9 211 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 RAB33AQ14088 237 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 RALGPS1Q5JS13 557 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 ZBTB37Q5TC79 503 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 LLGL2Q6P1M3 1020 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 JAZF1Q86VZ6 243 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 NLGN1Q8N2Q7 840 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 KCT2Q8NC54 265 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 R3HCC1Q9Y3T6 440 aaKnown RBP5.33□□□□□ -1.56
NF1-209ENST00000479536 ST14Q9Y5Y6 855 aa5.33□□□□□ -1.56
NF1-209ENST00000479536 RBAK-RBAKDNI3L0D1 243 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 SMAD7O15105 426 aaKnown RBP5.32□□□□□ -1.56
NF1-209ENST00000479536 LRIG2O94898 1065 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 BPNT1O95861 308 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 SRFP11831 508 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
NF1-209ENST00000479536 ZNF165P49910 485 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 EIF6P56537 245 aaKnown RBP5.32□□□□□ -1.56
NF1-209ENST00000479536 NFIXQ14938 502 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 TNNI3KQ59H18 835 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 DIEXFQ68CQ4 756 aaKnown RBP5.32□□□□□ -1.56
NF1-209ENST00000479536 ZNF662Q6ZS27 426 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 C22orf34Q6ZV56 151 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 REC114Q7Z4M0 266 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 FERD3LQ96RJ6 166 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 SRPK1Q96SB4 655 aaKnown RBP5.32□□□□□ -1.56
NF1-209ENST00000479536 CRBNQ96SW2 442 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 MIPEPQ99797 713 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 BRMS1Q9HCU9 246 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 TMEM59LQ9UK28 342 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 CAPN6Q9Y6Q1 641 aa5.32□□□□□ -1.56
NF1-209ENST00000479536 PPM1GO15355 546 aaPredicted RBP5.31□□□□□ -1.56
NF1-209ENST00000479536 CBX7O95931 251 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 GIPRP48546 466 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 RING1Q06587 406 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 FBXW10Q5XX13 1052 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 EGFLAMQ63HQ2 1017 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 THAP5Q7Z6K1 395 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 REXO1Q8N1G1 1221 aaKnown RBP5.31□□□□□ -1.56
NF1-209ENST00000479536 FAM169BQ8N8A8 192 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 ZNF507Q8TCN5 953 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 GAL3ST3Q96A11 431 aa5.31□□□□□ -1.56
NF1-209ENST00000479536 MRPL42Q9Y6G3 142 aaKnown RBP5.31□□□□□ -1.56
NF1-209ENST00000479536 TRHRP34981 398 aaPredicted RBP5.3□□□□□ -1.56
NF1-209ENST00000479536 DLG4P78352 724 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 CLCQ05315 142 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 PTPN11Q06124 597 aaPredicted RBP5.3□□□□□ -1.56
NF1-209ENST00000479536 SCARA3Q6AZY7 606 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 GK5Q6ZS86 529 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 BAHD1Q8TBE0 780 aaPredicted RBP5.3□□□□□ -1.56
NF1-209ENST00000479536 ELMO3Q96BJ8 720 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 KCNC2Q96PR1 638 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 DEPDC7Q96QD5 511 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 RNF32Q9H0A6 362 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 CACNA2D2Q9NY47 1150 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 SNTG2Q9NY99 539 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 ZNRF3Q9ULT6 936 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 PCDHA4Q9UN74 947 aa5.3□□□□□ -1.56
NF1-209ENST00000479536 SBNO2Q9Y2G9 1366 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 ADAMTS20P59510 1910 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 TRIM37O94972 964 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 HPXP02790 462 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 IMPDH2P12268 514 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 CDK11BP21127 795 aaKnown RBP5.29□□□□□ -1.56
NF1-209ENST00000479536 CDK8P49336 464 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 RPL6Q02878 288 aaKnown RBP5.29□□□□□ -1.56
NF1-209ENST00000479536 RASA3Q14644 834 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 TCEAL1Q15170 157 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 TCERG1LQ5VWI1 586 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.29□□□□□ -1.56
NF1-209ENST00000479536 LRP10Q7Z4F1 713 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 OR6P1Q8NGX9 317 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 MCOLN1Q9GZU1 580 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 ADAMTS10Q9H324 1103 aa5.29□□□□□ -1.56
NF1-209ENST00000479536 CNOT6Q9ULM6 557 aaKnown RBP5.29□□□□□ -1.56
NF1-209ENST00000479536 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.29□□□□□ -1.56
NF1-209ENST00000479536 FAM221BA6H8Z2 402 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms