RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SCHIP1Q9P0W5 487 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-209ENST00000479532 EGFL7Q9UHF1 273 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 MINPP1Q9UNW1 487 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 AKAP2Q9Y2D5 859 aa7.57□□□□□ -1.2
SF3B1-209ENST00000479532 CCDC88AQ3V6T2 1871 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 A6NJY4 79 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
SF3B1-209ENST00000479532 IFIT1P09914 478 aaKnown RBP7.56□□□□□ -1.2
SF3B1-209ENST00000479532 SPATA31C1P0DKV0 1188 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 SLC5A1P13866 664 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 YBX3P16989 372 aaKnown RBP eCLIP7.56□□□□□ -1.27e-7■□□□□ 10.5
SF3B1-209ENST00000479532 SMTNP53814 917 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 NAA30Q147X3 362 aaPredicted RBP7.56□□□□□ -1.2
SF3B1-209ENST00000479532 PUM3Q15397 648 aaKnown RBP7.56□□□□□ -1.2
SF3B1-209ENST00000479532 TLR1Q15399 786 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 LRRC24Q50LG9 513 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 JDP2Q8WYK2 163 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 XAGE2Q96GT9 111 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 ZC3H12CQ9C0D7 883 aaKnown RBP7.56□□□□□ -1.2
SF3B1-209ENST00000479532 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 PA2G4Q9UQ80 394 aaKnown RBP7.56□□□□□ -1.2
SF3B1-209ENST00000479532 NOP58Q9Y2X3 529 aaKnown RBP7.56□□□□□ -1.2
SF3B1-209ENST00000479532 RIPOR2Q9Y4F9 1068 aa7.56□□□□□ -1.2
SF3B1-209ENST00000479532 ZNF804BA4D1E1 1349 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 COL4A1P02462 1669 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 CHD4Q14839 1912 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 DICER1Q9UPY3 1922 aaKnown RBP7.55□□□□□ -1.2
SF3B1-209ENST00000479532 C2CD2LO14523 706 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 PPIP5K2O43314 1243 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 ICMTO60725 284 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 PDE8BO95263 885 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 LMNB1P20700 586 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 IARSP41252 1262 aaKnown RBP7.55□□□□□ -1.2
SF3B1-209ENST00000479532 HDAC1Q13547 482 aaPredicted RBP7.55□□□□□ -1.2
SF3B1-209ENST00000479532 MTMR3Q13615 1198 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 LRP8Q14114 963 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 UBE4AQ14139 1066 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 MTFR1Q15390 333 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 CAVIN4Q5BKX8 364 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 ZNF804AQ7Z570 1209 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 VPS37DQ86XT2 251 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 GLYCTKQ8IVS8 523 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 NIM1KQ8IY84 436 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 TBC1D16Q8TBP0 767 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 LPIN2Q92539 896 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 COL26A1Q96A83 441 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 VTI1AQ96AJ9 217 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 GCC1Q96CN9 775 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 KIF1BPQ96EK5 621 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 ESYT1Q9BSJ8 1104 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 RTFDC1Q9BY42 306 aaPredicted RBP7.55□□□□□ -1.2
SF3B1-209ENST00000479532 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 PUS3Q9BZE2 481 aaKnown RBP7.55□□□□□ -1.2
SF3B1-209ENST00000479532 ATXN7L1Q9ULK2 861 aaPredicted RBP7.55□□□□□ -1.2
SF3B1-209ENST00000479532 MED23Q9ULK4 1368 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 LTBP1Q14766 1721 aa7.55□□□□□ -1.2
SF3B1-209ENST00000479532 SBF1O95248 1867 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 SPATA31C2B4DYI2 1134 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 NFKBIEO00221 500 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 TAF5LO75529 589 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 TFCP2Q12800 502 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 CLN3Q13286 438 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 ATP2B3Q16720 1220 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 AOC3Q16853 763 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 GORABQ5T7V8 394 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 OLFM4Q6UX06 510 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 ATG9AQ7Z3C6 839 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 CLASRPQ8N2M8 674 aaKnown RBP7.54□□□□□ -1.2
SF3B1-209ENST00000479532 LRRCC1Q9C099 1032 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 ZNF277Q9NRM2 450 aaPredicted RBP7.54□□□□□ -1.2
SF3B1-209ENST00000479532 RNF181Q9P0P0 153 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 EXOC6BQ9Y2D4 811 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 TIAM2Q8IVF5 1701 aa7.54□□□□□ -1.2
SF3B1-209ENST00000479532 ARAP2Q8WZ64 1704 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 MYH13Q9UKX3 1938 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
SF3B1-209ENST00000479532 FRAT2O75474 233 aaPredicted RBP7.53□□□□□ -1.2
SF3B1-209ENST00000479532 FGFR3P22607 806 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 TXKP42681 527 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 EIF6P56537 245 aaKnown RBP7.53□□□□□ -1.2
SF3B1-209ENST00000479532 KIAA2012Q0VF49 1180 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 CHSY3Q70JA7 882 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 SIRT2Q8IXJ6 389 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 RHPN1Q8TCX5 695 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 NEUROD6Q96NK8 337 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 COA1Q9GZY4 146 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 DCTPP1Q9H773 170 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 GPR108Q9NPR9 543 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 GNL3LQ9NVN8 582 aaKnown RBP7.53□□□□□ -1.2
SF3B1-209ENST00000479532 POLLQ9UGP5 575 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 DUOX1Q9NRD9 1551 aa7.53□□□□□ -1.2
SF3B1-209ENST00000479532 ZNF609O15014 1411 aa7.52□□□□□ -1.2
SF3B1-209ENST00000479532 SNED1Q8TER0 1413 aa7.52□□□□□ -1.2
SF3B1-209ENST00000479532 A0A1B0GUL7 405 aa7.52□□□□□ -1.21
SF3B1-209ENST00000479532 THBS1P07996 1170 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms