RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 KIAA1524Q8TCG1 905 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 CHGBP05060 677 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 HDXQ7Z353 690 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 OR52Z1P0C646 297 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 DCAF17Q5H9S7 520 aaPredicted RBP15.99■□□□□ 0.15
COL20A1-206ENST00000479501 SCLT1Q96NL6 688 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 GSDMAQ96QA5 445 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 UIMC1Q96RL1 719 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 SELENOOQ9BVL4 669 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 RPAP1Q9BWH6 1393 aaPredicted RBP15.98■□□□□ 0.15
COL20A1-206ENST00000479501 CDC25BP30305 580 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 MECOMQ03112 1051 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 CEP57Q86XR8 500 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 LRRC47Q8N1G4 583 aaKnown RBP15.98■□□□□ 0.15
COL20A1-206ENST00000479501 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
COL20A1-206ENST00000479501 TECP42680 631 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 RFX5P48382 616 aaPredicted RBP15.98■□□□□ 0.15
COL20A1-206ENST00000479501 SCNN1DP51172 638 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 CYB5R4Q7L1T6 521 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 CTNNBL1Q8WYA6 563 aaPredicted RBP15.98■□□□□ 0.15
COL20A1-206ENST00000479501 APBA3O96018 575 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 SERPINB2P05120 415 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 PDE6BP35913 854 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 ETF1P62495 437 aaKnown RBP15.98■□□□□ 0.15
COL20A1-206ENST00000479501 RAPGEF1Q13905 1077 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 SLF1Q9BQI6 1058 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 TAOK3Q9H2K8 898 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 ADGRB2O60241 1585 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 WDR19Q8NEZ3 1342 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 ABCC12Q96J65 1359 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
COL20A1-206ENST00000479501 ZEB2O60315 1214 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 DOK7Q18PE1 504 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 STAG1Q8WVM7 1258 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
COL20A1-206ENST00000479501 FRMPD2Q68DX3 1309 aaPredicted RBP15.98■□□□□ 0.15
COL20A1-206ENST00000479501 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
COL20A1-206ENST00000479501 USP17L8P0C7I0 530 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 NCAPH2Q6IBW4 605 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 CCDC84Q86UT8 332 aaPredicted RBP15.97■□□□□ 0.15
COL20A1-206ENST00000479501 RPS6KA4O75676 772 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 BBOX1O75936 387 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 DESP17661 470 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 ERCC3P19447 782 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 TUBB2AQ13885 445 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 MORC3Q14149 939 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 ZYXQ15942 572 aaKnown RBP15.97■□□□□ 0.15
COL20A1-206ENST00000479501 USH1GQ495M9 461 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 DNAJC21Q5F1R6 531 aaKnown RBP15.97■□□□□ 0.15
COL20A1-206ENST00000479501 CCDC91Q7Z6B0 441 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 LMBR1Q8WVP7 490 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 CCDC51Q96ER9 411 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 TUBB2BQ9BVA1 445 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 STK32BQ9NY57 414 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 ZBTB21Q9ULJ3 1066 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 PCDHB6Q9Y5E3 794 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 ZNF609O15014 1411 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 MYOM1P52179 1685 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 KCNJ18B7U540 433 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 CHMP2AO43633 222 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 ERCC5P28715 1186 aaPredicted RBP15.97■□□□□ 0.15
COL20A1-206ENST00000479501 KCNJ12Q14500 433 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 ALX1Q15699 326 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 KIAA0825Q8IV33 1275 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 KAZALD1Q96I82 304 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 TSGA10Q9BZW7 698 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 MINPP1Q9UNW1 487 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 DNM3Q9UQ16 869 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 EXOSC10Q01780 885 aaKnown RBP15.97■□□□□ 0.15
COL20A1-206ENST00000479501 RAD51AP2Q09MP3 1159 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 PLS1Q14651 629 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 DIXDC1Q155Q3 683 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 NLGN1Q8N2Q7 840 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 LARGE2Q8N3Y3 721 aa15.97■□□□□ 0.15
COL20A1-206ENST00000479501 H7C1D1 291 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 SLFN14P0C7P3 912 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 CHMP4BP1P59074 171 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 OR8K1Q8NGG5 319 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 RASGRP4Q8TDF6 673 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 PDLIM2Q96JY6 352 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 NEDD4P46934 1319 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 LONRF3Q496Y0 759 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 PKD2L1Q9P0L9 805 aa15.96■□□□□ 0.15
COL20A1-206ENST00000479501 RPN1P04843 607 aaKnown RBP15.96■□□□□ 0.14
COL20A1-206ENST00000479501 EPB41P11171 864 aaKnown RBP15.96■□□□□ 0.14
COL20A1-206ENST00000479501 KIAA0753Q2KHM9 967 aa15.96■□□□□ 0.14
COL20A1-206ENST00000479501 NT5C3AQ9H0P0 336 aa15.96■□□□□ 0.14
COL20A1-206ENST00000479501 PSTPIP2Q9H939 334 aa15.96■□□□□ 0.14
COL20A1-206ENST00000479501 TBC1D7Q9P0N9 293 aa15.96■□□□□ 0.14
COL20A1-206ENST00000479501 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.96■□□□□ 0.14
COL20A1-206ENST00000479501 SRPRBQ9Y5M8 271 aaKnown RBP15.96■□□□□ 0.14
COL20A1-206ENST00000479501 VGLL3A8MV65 326 aa15.95■□□□□ 0.14
COL20A1-206ENST00000479501 JAKMIP2Q96AA8 810 aa15.95■□□□□ 0.14
COL20A1-206ENST00000479501 DESI2Q9BSY9 194 aa15.95■□□□□ 0.14
COL20A1-206ENST00000479501 DDIT3P35638 169 aa15.95■□□□□ 0.14
COL20A1-206ENST00000479501 KIF20BQ96Q89 1820 aa15.95■□□□□ 0.14
COL20A1-206ENST00000479501 TRPC5Q9UL62 973 aaPredicted RBP15.95■□□□□ 0.14
COL20A1-206ENST00000479501 PCDHA12Q9UN75 941 aa15.95■□□□□ 0.14
COL20A1-206ENST00000479501 WDHD1O75717 1129 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms