RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 hCG_1642624A0A1W2PR95 340 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 PSMD14O00487 310 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 CYTH3O43739 400 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 ZNF202O95125 648 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 MARCKSP29966 332 aaPredicted RBP11.3□□□□□ -0.6
RAD51B-208ENST00000479335 NDUFA8P51970 172 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 BLIDQ8IZY5 108 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 FAM200AQ8TCP9 573 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 RRP36Q96EU6 259 aaKnown RBP11.3□□□□□ -0.6
RAD51B-208ENST00000479335 PRMT6Q96LA8 375 aaPredicted RBP11.3□□□□□ -0.6
RAD51B-208ENST00000479335 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 NYAP2Q9P242 653 aa11.3□□□□□ -0.6
RAD51B-208ENST00000479335 DDTLA6NHG4 134 aaPredicted RBP11.29□□□□□ -0.6
RAD51B-208ENST00000479335 SPDYE2BA6NHP3 402 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 ZBTB7AO95365 584 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 SPDYE6P0CI01 402 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 PDHBP11177 359 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 PFKFB1P16118 471 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 DLGAP5Q15398 846 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 CERKLQ49MI3 558 aaPredicted RBP11.29□□□□□ -0.6
RAD51B-208ENST00000479335 HS1BP3Q53T59 392 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 GPATCH4Q5T3I0 446 aaKnown RBP11.29□□□□□ -0.6
RAD51B-208ENST00000479335 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 ZFPM1Q8IX07 1006 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 CKAP2LQ8IYA6 745 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 RNF214Q8ND24 703 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 FERMT2Q96AC1 680 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 SDF4Q9BRK5 362 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 TRIM34Q9BYJ4 488 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 TDRD3Q9H7E2 651 aaKnown RBP11.29□□□□□ -0.6
RAD51B-208ENST00000479335 ZNF277Q9NRM2 450 aaPredicted RBP11.29□□□□□ -0.6
RAD51B-208ENST00000479335 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 HERC5Q9UII4 1024 aaKnown RBP11.29□□□□□ -0.6
RAD51B-208ENST00000479335 SYNPO2Q9UMS6 1093 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 PCDHB6Q9Y5E3 794 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
RAD51B-208ENST00000479335 M0R2N6 131 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 CAPN15O75808 1086 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 GNA11P29992 359 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 SYKP43405 635 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 TCP10Q12799 353 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 USP17L2Q6R6M4 530 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 SH3BP5LQ7L8J4 393 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 ZSCAN29Q8IWY8 852 aaPredicted RBP11.28□□□□□ -0.6
RAD51B-208ENST00000479335 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 ZMYND12Q9H0C1 365 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 FAM13BQ9NYF5 915 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 SEC63Q9UGP8 760 aaKnown RBP11.28□□□□□ -0.6
RAD51B-208ENST00000479335 FBXO2Q9UK22 296 aaPredicted RBP11.28□□□□□ -0.6
RAD51B-208ENST00000479335 PCDHAC2Q9Y5I4 1007 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 LTBP3Q9NS15 1303 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 FER1L6Q2WGJ9 1857 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 BAZ2BQ9UIF8 2168 aaKnown RBP11.28□□□□□ -0.6
RAD51B-208ENST00000479335 SIPA1L1O43166 1804 aa11.28□□□□□ -0.6
RAD51B-208ENST00000479335 ESYT2A0FGR8 921 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 USP17L5A8MUK1 530 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 STXBP3O00186 592 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 RAD17O75943 681 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 ZNF543Q08ER8 600 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 TNIP1Q15025 636 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 STX1AQ16623 288 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 WWC2Q6AWC2 1192 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 TMEM179Q6ZVK1 233 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 JDP2Q8WYK2 163 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 TAOK3Q9H2K8 898 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 DNAJC18Q9H819 358 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 C6orf50Q9HD87 102 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 ANO10Q9NW15 660 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 KIAA1468Q9P260 1216 aa11.27□□□□□ -0.6
RAD51B-208ENST00000479335 BRCA1P38398 1863 aaKnown RBP11.27□□□□□ -0.6
RAD51B-208ENST00000479335 MPHOSPH10O00566 681 aaKnown RBP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 GOLGA8HP0CJ92 632 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 CACNB3P54284 484 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 CXCL9Q07325 125 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 TTC38Q5R3I4 469 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 ARL6IP4Q66PJ3 421 aaKnown RBP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 CIAPIN1Q6FI81 312 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 KANK3Q6NY19 840 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 FAM83AQ86UY5 434 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 DCAF4Q8WV16 495 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 TRIM44Q96DX7 344 aaPredicted RBP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 ZBED3Q96IU2 234 aaPredicted RBP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 ZNF70Q9UC06 446 aaPredicted RBP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 HOOK1Q9UJC3 728 aaKnown RBP11.27□□□□□ -0.61
RAD51B-208ENST00000479335 KCNH3Q9ULD8 1083 aa11.27□□□□□ -0.61
RAD51B-208ENST00000479335 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
RAD51B-208ENST00000479335 TBC1D12O60347 775 aa11.26□□□□□ -0.61
RAD51B-208ENST00000479335 RPS12P25398 132 aaKnown RBP11.26□□□□□ -0.61
RAD51B-208ENST00000479335 ATP2C1P98194 919 aaPredicted RBP11.26□□□□□ -0.61
RAD51B-208ENST00000479335 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
RAD51B-208ENST00000479335 ANO6Q4KMQ2 910 aa11.26□□□□□ -0.61
RAD51B-208ENST00000479335 EARS2Q5JPH6 523 aaKnown RBP11.26□□□□□ -0.61
RAD51B-208ENST00000479335 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
RAD51B-208ENST00000479335 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms