RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
CHD3-210ENST00000479080 PTPRFP10586 1907 aa15.29■□□□□ 0.04
CHD3-210ENST00000479080 UNCXA6NJT0 531 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 USP17L10C9JJH3 530 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 CALM1P0DP23 149 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 CALM2P0DP24 149 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 CALM3P0DP25 149 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 DDIT3P35638 169 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 BACE1P56817 501 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 PPIL2Q13356 520 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 BECN1Q14457 450 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 KCTD1Q719H9 257 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 C2orf69Q8N8R5 385 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 DCAF4Q8WV16 495 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 AS3MTQ9HBK9 375 aa15.28■□□□□ 0.04
CHD3-210ENST00000479080 PTPDC1A2A3K4 754 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 IFNAR1P17181 557 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 VCAM1P19320 739 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 HMGCS2P54868 508 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 HUNKP57058 714 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 FSTL1Q12841 308 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 SAPCD2Q86UD0 394 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 RASAL3Q86YV0 1011 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 PHKBQ93100 1093 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 INTS4Q96HW7 963 aaKnown RBP15.27■□□□□ 0.04
CHD3-210ENST00000479080 UBA5Q9GZZ9 404 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 GPCPD1Q9NPB8 672 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 TLL2Q9Y6L7 1015 aa15.27■□□□□ 0.04
CHD3-210ENST00000479080 A0A0G2JLL6 359 aaPredicted RBP15.26■□□□□ 0.03
CHD3-210ENST00000479080 PARP1P09874 1014 aaKnown RBP15.26■□□□□ 0.03
CHD3-210ENST00000479080 SLC16A2P36021 539 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 C1QTNF8P60827 252 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 PKN1Q16512 942 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 CCDC96Q2M329 555 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 ASPRV1Q53RT3 343 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 PRRT2Q7Z6L0 340 aaPredicted RBP15.26■□□□□ 0.03
CHD3-210ENST00000479080 CTCFLQ8NI51 663 aaPredicted RBP15.26■□□□□ 0.03
CHD3-210ENST00000479080 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 AIFM3Q96NN9 605 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 FEZ1Q99689 392 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 SH2D4AQ9H788 454 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 GOPCQ9HD26 462 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 FBXO28Q9NVF7 368 aa15.26■□□□□ 0.03
CHD3-210ENST00000479080 RBM28Q9NW13 759 aaKnown RBP15.26■□□□□ 0.03
CHD3-210ENST00000479080 hCG_1642624A0A1W2PR95 340 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 KLRF2D3W0D1 207 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 RAD21O60216 631 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 BMP3P12645 472 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 SLC1A4P43007 532 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 TREML2Q5T2D2 321 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 POTEEQ6S8J3 1075 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 BTNL9Q6UXG8 535 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 CCDC82Q8N4S0 544 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 DDX11Q96FC9 970 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 LLPHQ9BRT6 129 aaKnown RBP15.25■□□□□ 0.03
CHD3-210ENST00000479080 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 RIOX1Q9H6W3 641 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 RLFQ13129 1914 aa15.25■□□□□ 0.03
CHD3-210ENST00000479080 STK36Q9NRP7 1315 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 FAM155AB1AL88 458 aaPredicted RBP15.24■□□□□ 0.03
CHD3-210ENST00000479080 CXCL11O14625 94 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 WDR46O15213 610 aaKnown RBP15.24■□□□□ 0.03
CHD3-210ENST00000479080 FMNL1O95466 1100 aaPredicted RBP15.24■□□□□ 0.03
CHD3-210ENST00000479080 GJB2P29033 226 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 USP14P54578 494 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
CHD3-210ENST00000479080 SPRYD7Q5W111 196 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 GPAT2Q6NUI2 795 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 LPAR1Q92633 364 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 SLC10A4Q96EP9 437 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 JMJD4Q9H9V9 463 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 PARP14Q460N5 1801 aa15.24■□□□□ 0.03
CHD3-210ENST00000479080 TMEM88BA6NKF7 163 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 C19orf81C9J6K1 198 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 TMEM232C9JQI7 657 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
CHD3-210ENST00000479080 SLC10A3P09131 477 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 TAL1P17542 331 aaPredicted RBP15.23■□□□□ 0.03
CHD3-210ENST00000479080 KIF5BP33176 963 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 SNAP25P60880 206 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 PPP2R5BQ15173 497 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 GPATCH4Q5T3I0 446 aaKnown RBP15.23■□□□□ 0.03
CHD3-210ENST00000479080 BRI3BPQ8WY22 251 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 RPAP3Q9H6T3 665 aaPredicted RBP15.23■□□□□ 0.03
CHD3-210ENST00000479080 GJB4Q9NTQ9 266 aa15.23■□□□□ 0.03
CHD3-210ENST00000479080 PRPF3O43395 683 aaKnown RBP15.22■□□□□ 0.03
CHD3-210ENST00000479080 PLA2G6O60733 806 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 PKP1Q13835 747 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 SYDE2Q5VT97 1194 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 TYW1BQ6NUM6 668 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 RGMBQ6NW40 437 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 ADGRF4Q8IZF3 695 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 PIGSQ96S52 555 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 ZIC5Q96T25 663 aa15.22■□□□□ 0.03
CHD3-210ENST00000479080 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms