RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 RIC1Q4ADV7 1423 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 DHX16O60231 1041 aaKnown RBP7.19□□□□□ -1.26
CMSS1-203ENST00000478909 F13A1P00488 732 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 XRCC6P12956 609 aaKnown RBP eCLIP7.19□□□□□ -1.26
CMSS1-203ENST00000478909 EIF5P55010 431 aaKnown RBP7.19□□□□□ -1.26
CMSS1-203ENST00000478909 UBE2HP62256 183 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 TYRO3Q06418 890 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 TTC39AQ5SRH9 613 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 GORABQ5T7V8 394 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 ZNF34Q8IZ26 560 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 CEP63Q96MT8 703 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 NEK1Q96PY6 1258 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 SLC30A3Q99726 388 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 MTA3Q9BTC8 594 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 SCAND2PQ9GZW5 306 aaPredicted RBP7.19□□□□□ -1.26
CMSS1-203ENST00000478909 SUV39H2Q9H5I1 410 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 BRD7Q9NPI1 651 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 CCDC87Q9NVE4 849 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 ASAP1Q9ULH1 1129 aa7.19□□□□□ -1.26
CMSS1-203ENST00000478909 LAMA4Q16363 1823 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 KRBA1A5PL33 1030 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 GNB5O14775 395 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 PRPF40AO75400 957 aaKnown RBP7.18□□□□□ -1.26
CMSS1-203ENST00000478909 CAVIN2O95810 425 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 SYT1P21579 422 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 NASPP49321 788 aaPredicted RBP7.18□□□□□ -1.26
CMSS1-203ENST00000478909 EVCP57679 992 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 KRT85P78386 507 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 UBE3CQ15386 1083 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 PUM3Q15397 648 aaKnown RBP7.18□□□□□ -1.26
CMSS1-203ENST00000478909 ATP2B3Q16720 1220 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 ZSCAN23Q3MJ62 389 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 LRSAM1Q6UWE0 723 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 DHX32Q7L7V1 743 aaKnown RBP7.18□□□□□ -1.26
CMSS1-203ENST00000478909 TTLL11Q8NHH1 800 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 KLHDC4Q8TBB5 520 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 LPIN2Q92539 896 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 APPBP2Q92624 585 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 GTF3C6Q969F1 213 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 NGLY1Q96IV0 654 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 NEUROD6Q96NK8 337 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 ARXQ96QS3 562 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 CDC5LQ99459 802 aaKnown RBP7.18□□□□□ -1.26
CMSS1-203ENST00000478909 DNAJC2Q99543 621 aaKnown RBP7.18□□□□□ -1.26
CMSS1-203ENST00000478909 MDFIQ99750 246 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 ZSCAN16Q9H4T2 348 aaPredicted RBP7.18□□□□□ -1.26
CMSS1-203ENST00000478909 RIPOR2Q9Y4F9 1068 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 SCN7AQ01118 1682 aa7.18□□□□□ -1.26
CMSS1-203ENST00000478909 DDX60Q8IY21 1712 aaKnown RBP7.18□□□□□ -1.26
CMSS1-203ENST00000478909 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 ELOA3DA6NLF2 546 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 PIK3R2O00459 728 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 GOLIM4O00461 696 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 IRS4O14654 1257 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 PFKFB2O60825 505 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 SIN3BO75182 1162 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 PDE8BO95263 885 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 GJB2P29033 226 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 ARID4AP29374 1257 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 KCNQ4P56696 695 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 SPEM2Q0P670 501 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 PKP1Q13835 747 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 IMMTQ16891 758 aaKnown RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 UVSSAQ2YD98 709 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 ELOA3BQ3SY89 546 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 CCDC152Q4G0S7 254 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 METTL24Q5JXM2 366 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 CCDC183Q5T5S1 534 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 NAA16Q6N069 864 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 LDHAL6AQ6ZMR3 332 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 ZNF589Q86UQ0 364 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 ALYREFQ86V81 257 aaKnown RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 VGLL2Q8N8G2 317 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 ELOA3Q8NG57 546 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 ZNF274Q96GC6 653 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 PPP1R9BQ96SB3 815 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 SPOCK3Q9BQ16 436 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 UTP14AQ9BVJ6 771 aaKnown RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 GZF1Q9H116 711 aaPredicted RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 TRMT112Q9UI30 125 aaKnown RBP7.17□□□□□ -1.26
CMSS1-203ENST00000478909 SPATA31A6Q5VVP1 1343 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 CNTNAP4Q9C0A0 1308 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 DOCK2Q92608 1830 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 AKAP11Q9UKA4 1901 aa7.17□□□□□ -1.26
CMSS1-203ENST00000478909 LOC102724428A0A0B4J2F2 783 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 MSTNO14793 375 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 HSPD1P10809 573 aaKnown RBP7.16□□□□□ -1.26
CMSS1-203ENST00000478909 SLC5A1P13866 664 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 GNAT2P19087 354 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 IGFBP4P22692 258 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 MCM5P33992 734 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 PIP4K2AP48426 406 aaPredicted RBP7.16□□□□□ -1.26
CMSS1-203ENST00000478909 RCAN1P53805 252 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 SIK1P57059 783 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 FGD1P98174 961 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 SUZ12Q15022 739 aaKnown RBP7.16□□□□□ -1.26
CMSS1-203ENST00000478909 VPS72Q15906 364 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 ME3Q16798 604 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 ADCK5Q3MIX3 580 aa7.16□□□□□ -1.26
CMSS1-203ENST00000478909 LARP1BQ659C4 914 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms