RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 COL9A1P20849 921 aa20.8■□□□□ 0.92
VIM-204ENST00000478746 SIAH1Q8IUQ4 282 aa20.8■□□□□ 0.92
VIM-204ENST00000478746 TOX2Q96NM4 488 aa20.8■□□□□ 0.92
VIM-204ENST00000478746 SH2D4AQ9H788 454 aa20.8■□□□□ 0.92
VIM-204ENST00000478746 VCPKMTQ9H867 229 aa20.8■□□□□ 0.92
VIM-204ENST00000478746 DIS3Q9Y2L1 958 aaKnown RBP20.8■□□□□ 0.92
VIM-204ENST00000478746 TMX2Q9Y320 296 aa20.8■□□□□ 0.92
VIM-204ENST00000478746 A0A0G2JMZ2 1700 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 FAAP100Q0VG06 881 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 KCTD2Q14681 263 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 TTF1Q15361 905 aaPredicted RBP20.79■□□□□ 0.92
VIM-204ENST00000478746 SLC9C2Q5TAH2 1124 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 ZKSCAN2Q63HK3 967 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 ANKRD33Q7Z3H0 272 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 SLC44A5Q8NCS7 719 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 TIFAQ96CG3 184 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 TSEN34Q9BSV6 310 aaKnown RBP20.79■□□□□ 0.92
VIM-204ENST00000478746 SWAP70Q9UH65 585 aa20.79■□□□□ 0.92
VIM-204ENST00000478746 WDR46O15213 610 aaKnown RBP20.78■□□□□ 0.92
VIM-204ENST00000478746 ZNF865P0CJ78 1059 aaPredicted RBP20.78■□□□□ 0.92
VIM-204ENST00000478746 CYP2D6P10635 497 aa20.78■□□□□ 0.92
VIM-204ENST00000478746 AKR1A1P14550 325 aa20.78■□□□□ 0.92
VIM-204ENST00000478746 ICA1Q05084 483 aa20.78■□□□□ 0.92
VIM-204ENST00000478746 ZNF792Q3KQV3 632 aa20.78■□□□□ 0.92
VIM-204ENST00000478746 NUP133Q8WUM0 1156 aa20.78■□□□□ 0.92
VIM-204ENST00000478746 SDR42E1Q8WUS8 393 aa20.78■□□□□ 0.92
VIM-204ENST00000478746 DCP1AQ9NPI6 582 aaPredicted RBP20.78■□□□□ 0.92
VIM-204ENST00000478746 STARD7Q9NQZ5 370 aa20.78■□□□□ 0.92
VIM-204ENST00000478746 ADAMTS5Q9UNA0 930 aa20.78■□□□□ 0.92
VIM-204ENST00000478746 TIMP1P01033 207 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 AKR1B1P15121 316 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 PDE6AP16499 860 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 ACLYP53396 1101 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 AACSQ86V21 672 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 RIOX2Q8IUF8 465 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 CLEC10AQ8IUN9 316 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 PPM1EQ8WY54 764 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 DYNLL2Q96FJ2 89 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 GAS2L1Q99501 681 aaPredicted RBP20.77■□□□□ 0.92
VIM-204ENST00000478746 CNPY2Q9Y2B0 182 aa20.77■□□□□ 0.92
VIM-204ENST00000478746 NAV1Q8NEY1 1877 aa20.76■□□□□ 0.91
VIM-204ENST00000478746 ADAMTS4O75173 837 aa20.76■□□□□ 0.91
VIM-204ENST00000478746 STAT3P40763 770 aa20.76■□□□□ 0.91
VIM-204ENST00000478746 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.76■□□□□ 0.91
VIM-204ENST00000478746 MYO9BQ13459 2157 aa20.76■□□□□ 0.91
VIM-204ENST00000478746 ZNF532Q9HCE3 1301 aa20.76■□□□□ 0.91
VIM-204ENST00000478746 CCDC129Q6ZRS4 1044 aa20.75■□□□□ 0.91
VIM-204ENST00000478746 ERC1Q8IUD2 1116 aa20.75■□□□□ 0.91
VIM-204ENST00000478746 LENG1Q96BZ8 264 aaPredicted RBP20.75■□□□□ 0.91
VIM-204ENST00000478746 CCDC17Q96LX7 622 aa20.75■□□□□ 0.91
VIM-204ENST00000478746 FBXO28Q9NVF7 368 aa20.75■□□□□ 0.91
VIM-204ENST00000478746 FAM184BQ9ULE4 1060 aa20.75■□□□□ 0.91
VIM-204ENST00000478746 MOXD2PA6NHM9 499 aa20.74■□□□□ 0.91
VIM-204ENST00000478746 VWA5AO00534 786 aa20.74■□□□□ 0.91
VIM-204ENST00000478746 COPB2P35606 906 aa20.74■□□□□ 0.91
VIM-204ENST00000478746 KCNA10Q16322 511 aa20.74■□□□□ 0.91
VIM-204ENST00000478746 MFSD5Q6N075 450 aa20.74■□□□□ 0.91
VIM-204ENST00000478746 CCDC174Q6PII3 467 aa20.74■□□□□ 0.91
VIM-204ENST00000478746 LCORLQ8N3X6 602 aa20.74■□□□□ 0.91
VIM-204ENST00000478746 ATXN2LQ8WWM7 1075 aaKnown RBP20.74■□□□□ 0.91
VIM-204ENST00000478746 MUC3AQ02505 3323 aa20.74■□□□□ 0.91
VIM-204ENST00000478746 ROBO3Q96MS0 1386 aa20.73■□□□□ 0.91
VIM-204ENST00000478746 PLXNA1Q9UIW2 1896 aa20.73■□□□□ 0.91
VIM-204ENST00000478746 PPIGQ13427 754 aaKnown RBP eCLIP20.73■□□□□ 0.91
VIM-204ENST00000478746 KLHDC9Q8NEP7 349 aa20.73■□□□□ 0.91
VIM-204ENST00000478746 EXOC6BQ9Y2D4 811 aa20.73■□□□□ 0.91
VIM-204ENST00000478746 COL11A1P12107 1806 aaPredicted RBP20.73■□□□□ 0.91
VIM-204ENST00000478746 TCRBV5S4A2TA0A5A2 114 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 EEF2P13639 858 aaKnown RBP20.72■□□□□ 0.91
VIM-204ENST00000478746 CDK8P49336 464 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 TMEM240Q5SV17 173 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 AKNAD1Q5T1N1 836 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 C16orf59Q7L2K0 433 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 FTSJ3Q8IY81 847 aaKnown RBP20.72■□□□□ 0.91
VIM-204ENST00000478746 MSL3Q8N5Y2 521 aaKnown RBP20.72■□□□□ 0.91
VIM-204ENST00000478746 VTI1AQ96AJ9 217 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 PBX4Q9BYU1 374 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 PRDM12Q9H4Q4 367 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 ARMT1Q9H993 441 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 ATP8A2Q9NTI2 1148 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 TBX21Q9UL17 535 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 ZNF214Q9UL59 606 aaPredicted RBP20.72■□□□□ 0.91
VIM-204ENST00000478746 PPP1R9AQ9ULJ8 1098 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 MROH7Q68CQ1 1323 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 SYNRGQ9UMZ2 1314 aa20.72■□□□□ 0.91
VIM-204ENST00000478746 PARP14Q460N5 1801 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 MYH8P13535 1937 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 GRXCR1A8MXD5 290 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 GOLIM4O00461 696 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 RAD21O60216 631 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 PBX2P40425 430 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 CCSAPQ6IQ19 270 aaPredicted RBP20.71■□□□□ 0.91
VIM-204ENST00000478746 DDX11Q96FC9 970 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 GLT1D1Q96MS3 346 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 ASB2Q96Q27 587 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 KANSL2Q9H9L4 492 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 GOPCQ9HD26 462 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 IL1RAPL2Q9NP60 686 aa20.71■□□□□ 0.91
VIM-204ENST00000478746 ELP1O95163 1332 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms