RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 TMEM139Q8IV31 216 aa20.52■□□□□ 0.87
PDE8A-204ENST00000478717 TRMT44Q8IYL2 757 aaKnown RBP20.52■□□□□ 0.87
PDE8A-204ENST00000478717 CCDC12Q8WUD4 166 aaPredicted RBP20.52■□□□□ 0.87
PDE8A-204ENST00000478717 PHF20Q9BVI0 1012 aa20.52■□□□□ 0.87
PDE8A-204ENST00000478717 DCP1AQ9NPI6 582 aaPredicted RBP20.52■□□□□ 0.87
PDE8A-204ENST00000478717 ZSCAN12O43309 604 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 IVLP07476 585 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 KIFC2Q96AC6 838 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 MYCBPQ99417 103 aaPredicted RBP20.51■□□□□ 0.87
PDE8A-204ENST00000478717 A0A087X0B3 334 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 GNPATO15228 680 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 PRPF3O43395 683 aaKnown RBP20.51■□□□□ 0.87
PDE8A-204ENST00000478717 XBP1P17861 261 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 CASP1P29466 404 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 BEND6Q5SZJ8 279 aaPredicted RBP20.51■□□□□ 0.87
PDE8A-204ENST00000478717 LRRC31Q6UY01 552 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 CCDC102AQ96A19 550 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 C8orf37Q96NL8 207 aa20.51■□□□□ 0.87
PDE8A-204ENST00000478717 TRIM75PA6NK02 468 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 KRT2P35908 639 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 ZNF174Q15697 407 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 ABCB6Q9NP58 842 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 HOOK1Q9UJC3 728 aaKnown RBP20.5■□□□□ 0.87
PDE8A-204ENST00000478717 NRAPQ86VF7 1730 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 RREB1Q92766 1687 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 CCDC151A5D8V7 595 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 ACTN4O43707 911 aaKnown RBP20.5■□□□□ 0.87
PDE8A-204ENST00000478717 MTF1Q14872 753 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 SRBD1Q8N5C6 995 aaKnown RBP20.5■□□□□ 0.87
PDE8A-204ENST00000478717 ANKZF1Q9H8Y5 726 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 CEP131Q9UPN4 1083 aa20.5■□□□□ 0.87
PDE8A-204ENST00000478717 ZPR1O75312 459 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 FGRP09769 529 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 RHOXF2BP0C7M4 288 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 AFMP43652 599 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 ZNF579Q8NAF0 562 aaKnown RBP20.49■□□□□ 0.87
PDE8A-204ENST00000478717 RHOXF2Q9BQY4 288 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 INTS13Q9NVM9 706 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 NARFQ9UHQ1 456 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 SARSP49591 514 aaKnown RBP20.49■□□□□ 0.87
PDE8A-204ENST00000478717 MED15Q96RN5 788 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 LZTFL1Q9NQ48 299 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 NFE2L3Q9Y4A8 694 aa20.49■□□□□ 0.87
PDE8A-204ENST00000478717 ADAMTS3O15072 1205 aa20.48■□□□□ 0.87
PDE8A-204ENST00000478717 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
PDE8A-204ENST00000478717 NGLY1Q96IV0 654 aa20.48■□□□□ 0.87
PDE8A-204ENST00000478717 BAG1Q99933 345 aaPredicted RBP20.48■□□□□ 0.87
PDE8A-204ENST00000478717 PSEN1P49768 467 aa20.48■□□□□ 0.87
PDE8A-204ENST00000478717 USP17L8P0C7I0 530 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 NPY5RQ15761 445 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 TPTE2Q6XPS3 522 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 TMTC3Q6ZXV5 915 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 VSTM4Q8IW00 320 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 CRNKL1Q9BZJ0 848 aaKnown RBP20.47■□□□□ 0.87
PDE8A-204ENST00000478717 DEF6Q9H4E7 631 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 MRPL44Q9H9J2 332 aaKnown RBP20.47■□□□□ 0.87
PDE8A-204ENST00000478717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.47■□□□□ 0.87
PDE8A-204ENST00000478717 MORC3Q14149 939 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 NT5DC1Q5TFE4 455 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 STAMQ92783 540 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 NYXQ9GZU5 481 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 BRMS1Q9HCU9 246 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 RBM28Q9NW13 759 aaKnown RBP20.47■□□□□ 0.87
PDE8A-204ENST00000478717 ARHGAP6O43182 974 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 CBFA2T2O43439 604 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 RPS6KA4O75676 772 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 CORO7P57737 925 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 JAKMIP3Q5VZ66 844 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 HDXQ7Z353 690 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 ELOA2Q8IYF1 753 aaPredicted RBP20.47■□□□□ 0.87
PDE8A-204ENST00000478717 SYMPKQ92797 1274 aaKnown RBP20.47■□□□□ 0.87
PDE8A-204ENST00000478717 SAMSN1Q9NSI8 373 aaKnown RBP20.47■□□□□ 0.87
PDE8A-204ENST00000478717 MCM9Q9NXL9 1143 aa20.47■□□□□ 0.87
PDE8A-204ENST00000478717 LAMB2P55268 1798 aa20.46■□□□□ 0.87
PDE8A-204ENST00000478717 CNTNAP4Q9C0A0 1308 aa20.46■□□□□ 0.87
PDE8A-204ENST00000478717 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
PDE8A-204ENST00000478717 TSPY2A6NKD2 308 aa20.46■□□□□ 0.87
PDE8A-204ENST00000478717 MYCNP04198 464 aaPredicted RBP20.46■□□□□ 0.87
PDE8A-204ENST00000478717 TM4SF1P30408 202 aa20.46■□□□□ 0.87
PDE8A-204ENST00000478717 CTCFLQ8NI51 663 aaPredicted RBP20.46■□□□□ 0.87
PDE8A-204ENST00000478717 ARHGEF1Q92888 912 aaKnown RBP20.46■□□□□ 0.87
PDE8A-204ENST00000478717 SEMA3EO15041 775 aa20.46■□□□□ 0.87
PDE8A-204ENST00000478717 BRD3Q15059 726 aa20.46■□□□□ 0.87
PDE8A-204ENST00000478717 MLKLQ8NB16 471 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 PPM1EQ8WY54 764 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 CALM1P0DP23 149 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 CALM2P0DP24 149 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 CALM3P0DP25 149 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 CT47A1Q5JQC4 288 aaPredicted RBP20.45■□□□□ 0.86
PDE8A-204ENST00000478717 KLHL10Q6JEL2 608 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 PIK3AP1Q6ZUJ8 805 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 MICALL1Q8N3F8 863 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 ANKRD2Q9GZV1 360 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 ATP8A2Q9NTI2 1148 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 L1RE1Q9UN81 338 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 CNTNAP5Q8WYK1 1306 aa20.45■□□□□ 0.86
PDE8A-204ENST00000478717 MYH13Q9UKX3 1938 aa20.44■□□□□ 0.86
PDE8A-204ENST00000478717 PTGDRQ13258 359 aa20.44■□□□□ 0.86
PDE8A-204ENST00000478717 DYNLL2Q96FJ2 89 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms