RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 BLOC1S2Q6QNY1 142 aa13.34□□□□□ -0.27
SRRT-211ENST00000478693 DCAF4Q8WV16 495 aa13.34□□□□□ -0.27
SRRT-211ENST00000478693 P2RX7Q99572 595 aaKnown RBP13.34□□□□□ -0.27
SRRT-211ENST00000478693 CWC22Q9HCG8 908 aaKnown RBP13.34□□□□□ -0.27
SRRT-211ENST00000478693 FRMPD2Q68DX3 1309 aaPredicted RBP13.34□□□□□ -0.27
SRRT-211ENST00000478693 CCDC69A6NI79 296 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
SRRT-211ENST00000478693 TMEM232C9JQI7 657 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 NOVP48745 357 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 STAT2P52630 851 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 ANTXR2P58335 489 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 SP3Q02447 781 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 COG2Q14746 738 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 TSGA10IPQ3SY00 556 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 RCSD1Q6JBY9 416 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 KCTD1Q719H9 257 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 RASGRP2Q7LDG7 609 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.28
SRRT-211ENST00000478693 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
SRRT-211ENST00000478693 ERO1AQ96HE7 468 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 GMCL1Q96IK5 515 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 SLF1Q9BQI6 1058 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 LRRC2Q9BYS8 371 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 UPF2Q9HAU5 1272 aaKnown RBP13.33□□□□□ -0.28
SRRT-211ENST00000478693 ADGRA2Q96PE1 1338 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
SRRT-211ENST00000478693 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
SRRT-211ENST00000478693 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
SRRT-211ENST00000478693 DSG3P32926 999 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 PLS1Q14651 629 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 SEC23AQ15436 765 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 FAM110CQ1W6H9 321 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 FAM160B2Q86V87 743 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 CD99L2Q8TCZ2 262 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 KIFC2Q96AC6 838 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 ATG4CQ96DT6 458 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 TCEANC2Q96MN5 208 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 GPCPD1Q9NPB8 672 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 FBXO28Q9NVF7 368 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 FEM1BQ9UK73 627 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 PPP1R9AQ9ULJ8 1098 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 MYPNQ86TC9 1320 aa13.32□□□□□ -0.28
SRRT-211ENST00000478693 SEC24BO95487 1268 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 PDHBP11177 359 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 BCRP11274 1271 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 ARHGEF6Q15052 776 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 NOM1Q5C9Z4 860 aaKnown RBP13.31□□□□□ -0.28
SRRT-211ENST00000478693 WDR78Q5VTH9 848 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 C17orf99Q6UX52 265 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 SYNE3Q6ZMZ3 975 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 DHX32Q7L7V1 743 aaKnown RBP13.31□□□□□ -0.28
SRRT-211ENST00000478693 GPRC5AQ8NFJ5 357 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 CHURC1Q8WUH1 139 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 KCNB2Q92953 911 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 NAP1L2Q9ULW6 460 aaPredicted RBP13.31□□□□□ -0.28
SRRT-211ENST00000478693 WDR19Q8NEZ3 1342 aa13.31□□□□□ -0.28
SRRT-211ENST00000478693 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
SRRT-211ENST00000478693 ZBED4O75132 1171 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 FMNL1O95466 1100 aaPredicted RBP13.3□□□□□ -0.28
SRRT-211ENST00000478693 PARP1P09874 1014 aaKnown RBP13.3□□□□□ -0.28
SRRT-211ENST00000478693 CPA1P15085 419 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 FCGRTP55899 365 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 ERVK-24P63145 666 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 CCNA1P78396 465 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 LACTBP83111 547 aaPredicted RBP13.3□□□□□ -0.28
SRRT-211ENST00000478693 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 GPATCH4Q5T3I0 446 aaKnown RBP13.3□□□□□ -0.28
SRRT-211ENST00000478693 TMTC2Q8N394 836 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 MB21D1Q8N884 522 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 ANKS1AQ92625 1134 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 LY9Q9HBG7 655 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 PRDM10Q9NQV6 1147 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 RABGAP1Q9Y3P9 1069 aa13.3□□□□□ -0.28
SRRT-211ENST00000478693 PEX10O60683 326 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 DDAH1O94760 285 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 GOLGA8HP0CJ92 632 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 RPS6KB1P23443 525 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 SLC16A2P36021 539 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 ZNF543Q08ER8 600 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 LBX2Q6XYB7 198 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 ZNF654Q8IZM8 581 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
SRRT-211ENST00000478693 CTCFLQ8NI51 663 aaPredicted RBP13.29□□□□□ -0.28
SRRT-211ENST00000478693 IGDCC4Q8TDY8 1250 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 MYL10Q9BUA6 226 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
SRRT-211ENST00000478693 MORF4L1Q9UBU8 362 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 TRIM17Q9Y577 477 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 SLC12A7Q9Y666 1083 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
SRRT-211ENST00000478693 VWA5AO00534 786 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms