RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 PPP1R13LQ8WUF5 828 aa8.63□□□□□ -1.03
ITGA4-209ENST00000478440 NKD1Q969G9 470 aa8.63□□□□□ -1.03
ITGA4-209ENST00000478440 MBNL3Q9NUK0 354 aaKnown RBP8.63□□□□□ -1.03
ITGA4-209ENST00000478440 GPATCH2Q9NW75 528 aa8.63□□□□□ -1.03
ITGA4-209ENST00000478440 CNTNAP4Q9C0A0 1308 aa8.62□□□□□ -1.03
ITGA4-209ENST00000478440 CHURC1-FNTBB4DL54 471 aa8.62□□□□□ -1.03
ITGA4-209ENST00000478440 RAG1P15918 1043 aa8.62□□□□□ -1.03
ITGA4-209ENST00000478440 RANGAP1P46060 587 aaPredicted RBP8.62□□□□□ -1.03
ITGA4-209ENST00000478440 RAD51AP2Q09MP3 1159 aa8.62□□□□□ -1.03
ITGA4-209ENST00000478440 SLITRK4Q8IW52 837 aa8.62□□□□□ -1.03
ITGA4-209ENST00000478440 ATP13A1Q9HD20 1204 aa8.62□□□□□ -1.03
ITGA4-209ENST00000478440 RNF114Q9Y508 228 aa8.62□□□□□ -1.03
ITGA4-209ENST00000478440 SLC22A31A6NKX4 558 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 RGS13O14921 159 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 MCM4P33991 863 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 CCNFP41002 786 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 RNF4P78317 190 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 UBE2FQ969M7 185 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 GPR62Q9BZJ7 368 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.61□□□□□ -1.03
ITGA4-209ENST00000478440 UBP1Q9NZI7 540 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 ZSWIM5Q9P217 1185 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 CCDC9Q9Y3X0 531 aaKnown RBP8.61□□□□□ -1.03
ITGA4-209ENST00000478440 RIMS1Q86UR5 1692 aaKnown RBP8.61□□□□□ -1.03
ITGA4-209ENST00000478440 RAPGEF6Q8TEU7 1601 aa8.61□□□□□ -1.03
ITGA4-209ENST00000478440 IMPDH2P12268 514 aa8.6□□□□□ -1.03
ITGA4-209ENST00000478440 CRKP46108 304 aa8.6□□□□□ -1.03
ITGA4-209ENST00000478440 DTWD2Q8NBA8 298 aa8.6□□□□□ -1.03
ITGA4-209ENST00000478440 FLAD1Q8NFF5 587 aa8.6□□□□□ -1.03
ITGA4-209ENST00000478440 KREMEN1Q96MU8 473 aa8.6□□□□□ -1.03
ITGA4-209ENST00000478440 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
ITGA4-209ENST00000478440 CARS2Q9HA77 564 aaKnown RBP8.6□□□□□ -1.03
ITGA4-209ENST00000478440 ABCA9Q8IUA7 1624 aa8.6□□□□□ -1.03
ITGA4-209ENST00000478440 BCORL1Q5H9F3 1711 aa8.6□□□□□ -1.03
ITGA4-209ENST00000478440 ARAP3Q8WWN8 1544 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 ARSHQ5FYA8 562 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 CDCP2Q5VXM1 449 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 LRRN4CLQ8ND94 238 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 BAHD1Q8TBE0 780 aaPredicted RBP8.59□□□□□ -1.03
ITGA4-209ENST00000478440 FBXO41Q8TF61 875 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 SPATA32Q96LK8 384 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 KIF2CQ99661 725 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 ASCC2Q9H1I8 757 aaPredicted RBP8.59□□□□□ -1.03
ITGA4-209ENST00000478440 ADAMTS6Q9UKP5 1117 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 ADAMTSL3P82987 1691 aa8.59□□□□□ -1.03
ITGA4-209ENST00000478440 CFAP74Q9C0B2 1584 aa8.58□□□□□ -1.04
ITGA4-209ENST00000478440 GK5Q6ZS86 529 aa8.58□□□□□ -1.04
ITGA4-209ENST00000478440 ZNF654Q8IZM8 581 aa8.58□□□□□ -1.04
ITGA4-209ENST00000478440 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
ITGA4-209ENST00000478440 Q96M66 194 aa8.58□□□□□ -1.04
ITGA4-209ENST00000478440 PTPRMP28827 1452 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 RAPGEF3O95398 923 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 RECKO95980 971 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 TPP2P29144 1249 aaPredicted RBP8.57□□□□□ -1.04
ITGA4-209ENST00000478440 AFMP43652 599 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 NLRC3Q7RTR2 1065 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 TMEM40Q8WWA1 233 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 MRRFQ96E11 262 aaKnown RBP8.57□□□□□ -1.04
ITGA4-209ENST00000478440 EAF1Q96JC9 268 aaPredicted RBP8.57□□□□□ -1.04
ITGA4-209ENST00000478440 ALPK1Q96QP1 1244 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 CNNM2Q9H8M5 875 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 PHLDB1Q86UU1 1377 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 ATP10BO94823 1461 aa8.57□□□□□ -1.04
ITGA4-209ENST00000478440 FER1L4A9Z1Z3 1794 aa8.56□□□□□ -1.04
ITGA4-209ENST00000478440 DNAJA2O60884 412 aa8.56□□□□□ -1.04
ITGA4-209ENST00000478440 PAPLNO95428 1278 aa8.56□□□□□ -1.04
ITGA4-209ENST00000478440 SRFP11831 508 aa8.56□□□□□ -1.04
ITGA4-209ENST00000478440 COL9A2Q14055 689 aaPredicted RBP8.56□□□□□ -1.04
ITGA4-209ENST00000478440 OVOS1Q6IE37 1185 aa8.56□□□□□ -1.04
ITGA4-209ENST00000478440 TSPYL5Q86VY4 417 aaPredicted RBP8.56□□□□□ -1.04
ITGA4-209ENST00000478440 DUSP15Q9H1R2 295 aaPredicted RBP8.56□□□□□ -1.04
ITGA4-209ENST00000478440 DDX41Q9UJV9 622 aaKnown RBP8.56□□□□□ -1.04
ITGA4-209ENST00000478440 NEO1Q92859 1461 aa8.56□□□□□ -1.04
ITGA4-209ENST00000478440 PCF11O94913 1555 aaKnown RBP8.56□□□□□ -1.04
ITGA4-209ENST00000478440 MEIS3P2A8K0S8 358 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 GDNFP39905 211 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 CLCQ05315 142 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 CLEC16AQ2KHT3 1053 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 ZNF394Q53GI3 561 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 CREG2Q8IUH2 290 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 ENOX1Q8TC92 643 aaKnown RBP8.55□□□□□ -1.04
ITGA4-209ENST00000478440 ATG4CQ96DT6 458 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 PRDM7Q9NQW5 492 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 DUSP13Q9UII6 198 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 PRXQ9BXM0 1461 aa8.55□□□□□ -1.04
ITGA4-209ENST00000478440 POGZQ7Z3K3 1410 aa8.54□□□□□ -1.04
ITGA4-209ENST00000478440 ARHGEF40Q8TER5 1519 aa8.54□□□□□ -1.04
ITGA4-209ENST00000478440 SAMD9Q5K651 1589 aa8.54□□□□□ -1.04
ITGA4-209ENST00000478440 RGS22Q8NE09 1264 aa8.54□□□□□ -1.04
ITGA4-209ENST00000478440 FAM168AQ92567 244 aa8.54□□□□□ -1.04
ITGA4-209ENST00000478440 CTNND2Q9UQB3 1225 aa8.54□□□□□ -1.04
ITGA4-209ENST00000478440 RICTORQ6R327 1708 aa8.54□□□□□ -1.04
ITGA4-209ENST00000478440 FRMPD1Q5SYB0 1578 aa8.53□□□□□ -1.04
ITGA4-209ENST00000478440 FANCAO15360 1455 aa8.53□□□□□ -1.04
ITGA4-209ENST00000478440 DENND4BO75064 1496 aaPredicted RBP8.53□□□□□ -1.04
ITGA4-209ENST00000478440 CLEC3AO75596 197 aa8.53□□□□□ -1.04
ITGA4-209ENST00000478440 UBOX5O94941 541 aa8.53□□□□□ -1.04
ITGA4-209ENST00000478440 RAC2P15153 192 aa8.53□□□□□ -1.04
ITGA4-209ENST00000478440 NME1P15531 152 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms