RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 NOS3P29474 1203 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 TYRO3Q06418 890 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 AIMP1Q12904 312 aaKnown RBP5.87□□□□□ -1.47
SF3B6-202ENST00000478050 GCKRQ14397 625 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 SH3PXD2AQ5TCZ1 1133 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 PRR23CQ6ZRP0 262 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 DTWD1Q8N5C7 304 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 XAGE3Q8WTP9 111 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 EAF2Q96CJ1 260 aaPredicted RBP5.87□□□□□ -1.47
SF3B6-202ENST00000478050 MYD88Q99836 296 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 COPRSQ9NQ92 184 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 PDRG1Q9NUG6 133 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 DNAJB12Q9NXW2 375 aaKnown RBP5.87□□□□□ -1.47
SF3B6-202ENST00000478050 TMEM63CQ9P1W3 806 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 MAFBQ9Y5Q3 323 aaPredicted RBP5.87□□□□□ -1.47
SF3B6-202ENST00000478050 CYP46A1Q9Y6A2 500 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 IVNS1ABPQ9Y6Y0 642 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 MED23Q9ULK4 1368 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 ANKRD36CQ5JPF3 1778 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 MYH3P11055 1940 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 STX6O43752 255 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 LETM1O95202 739 aaPredicted RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 SKIP12755 728 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 MYL6BP14649 208 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 KCNJ4P48050 445 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 CABP4P57796 275 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 PTH1RQ03431 593 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 NMIQ13287 307 aaPredicted RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 SLC39A6Q13433 755 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 NECTIN1Q15223 517 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 ANKRD1Q15327 319 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 RABL6Q3YEC7 729 aaPredicted RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 CREB3L3Q68CJ9 461 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 PRPF40BQ6NWY9 871 aaKnown RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 IGF2-ASQ6U949 168 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 RUFY3Q7L099 469 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 COPS6Q7L5N1 327 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 LRP10Q7Z4F1 713 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 ZSCAN30Q86W11 494 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 FBXO11Q86XK2 927 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 TICAM2Q86XR7 235 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 NFATC2IPQ8NCF5 419 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 NLGN2Q8NFZ4 835 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 MAP4K1Q92918 833 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 ZNF496Q96IT1 587 aaPredicted RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 PDLIM2Q96JY6 352 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 JAKMIP1Q96N16 626 aaKnown RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 FSD1Q9BTV5 496 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 PHACTR1Q9C0D0 580 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 CCDC8Q9H0W5 538 aaPredicted RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 RBSNQ9H1K0 784 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 ALDH8A1Q9H2A2 487 aaPredicted RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 TSPY26PQ9H489 355 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 EFCC1Q9HA90 598 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 HMG20BQ9P0W2 317 aa5.86□□□□□ -1.47
SF3B6-202ENST00000478050 RBM8AQ9Y5S9 174 aaKnown RBP5.86□□□□□ -1.47
SF3B6-202ENST00000478050 ITGB4P16144 1822 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 KCPQ6ZWJ8 1503 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 SYCE3A1L190 88 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 SLC27A2O14975 620 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 CYP27B1O15528 508 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 ATP9BO43861 1147 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 LZTS3O60299 673 aaPredicted RBP5.85□□□□□ -1.47
SF3B6-202ENST00000478050 ATG7O95352 703 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 F13A1P00488 732 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 ATP5JP18859 108 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 FSTP19883 344 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 SYT1P21579 422 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 RFX5P48382 616 aaPredicted RBP5.85□□□□□ -1.47
SF3B6-202ENST00000478050 CTCFP49711 727 aaPredicted RBP5.85□□□□□ -1.47
SF3B6-202ENST00000478050 EPHA4P54764 986 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 PSMA6P60900 246 aaKnown RBP5.85□□□□□ -1.47
SF3B6-202ENST00000478050 UBE2HP62256 183 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 KRT32Q14532 448 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 UVSSAQ2YD98 709 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 CCDC183Q5T5S1 534 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 MSL1Q68DK7 614 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 USP48Q86UV5 1035 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 FAM184AQ8NB25 1140 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 ZNF280CQ8ND82 737 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 PLBD2Q8NHP8 589 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 MEGF10Q96KG7 1140 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 SUSD3Q96L08 255 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 VRTNQ9H8Y1 702 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 RNF114Q9Y508 228 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 RGPD3A6NKT7 1758 aaPredicted RBP5.85□□□□□ -1.47
SF3B6-202ENST00000478050 RGPD4Q7Z3J3 1758 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 TOGARAM1Q9Y4F4 1720 aa5.85□□□□□ -1.47
SF3B6-202ENST00000478050 PCDH11XQ9BZA7 1347 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 PCDH11YQ9BZA8 1340 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 WNK3Q9BYP7 1800 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 ERVV-2B6SEH9 535 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 DLL1O00548 723 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 PTCD1O75127 700 aaKnown RBP5.84□□□□□ -1.47
SF3B6-202ENST00000478050 TAL1P17542 331 aaPredicted RBP5.84□□□□□ -1.47
SF3B6-202ENST00000478050 PDCP20941 246 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 RPS6KB1P23443 525 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 MSNP26038 577 aaKnown RBP5.84□□□□□ -1.47
SF3B6-202ENST00000478050 GJB2P29033 226 aa5.84□□□□□ -1.47
SF3B6-202ENST00000478050 MCM5P33992 734 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms