RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 YBX1P67809 324 aaKnown RBP6.72□□□□□ -1.33
NCKAP1-204ENST00000477988 SIRT2Q8IXJ6 389 aa6.72□□□□□ -1.33
NCKAP1-204ENST00000477988 GNA15P30679 374 aa6.71□□□□□ -1.34
NCKAP1-204ENST00000477988 CDR1P51861 262 aa6.71□□□□□ -1.34
NCKAP1-204ENST00000477988 TMEM201Q5SNT2 666 aa6.71□□□□□ -1.34
NCKAP1-204ENST00000477988 ZFYVE27Q5T4F4 411 aa6.71□□□□□ -1.34
NCKAP1-204ENST00000477988 LDHBP07195 334 aaKnown RBP6.7□□□□□ -1.34
NCKAP1-204ENST00000477988 TNFRSF1AP19438 455 aa6.7□□□□□ -1.34
NCKAP1-204ENST00000477988 CCDC84Q86UT8 332 aaPredicted RBP6.7□□□□□ -1.34
NCKAP1-204ENST00000477988 FAM13CQ8NE31 585 aa6.7□□□□□ -1.34
NCKAP1-204ENST00000477988 MZB1Q8WU39 189 aa6.7□□□□□ -1.34
NCKAP1-204ENST00000477988 ASPNQ9BXN1 380 aa6.7□□□□□ -1.34
NCKAP1-204ENST00000477988 CRTAC1Q9NQ79 661 aa6.7□□□□□ -1.34
NCKAP1-204ENST00000477988 TFE3P19532 575 aaPredicted RBP6.69□□□□□ -1.34
NCKAP1-204ENST00000477988 ZXDAP98168 799 aa6.69□□□□□ -1.34
NCKAP1-204ENST00000477988 SLFN12Q8IYM2 578 aa6.69□□□□□ -1.34
NCKAP1-204ENST00000477988 AK5Q9Y6K8 562 aa6.69□□□□□ -1.34
NCKAP1-204ENST00000477988 UPK3BL1B0FP48 263 aa6.68□□□□□ -1.34
NCKAP1-204ENST00000477988 UPK3BL2E5RIL1 263 aa6.68□□□□□ -1.34
NCKAP1-204ENST00000477988 OVOL3O00110 214 aa6.68□□□□□ -1.34
NCKAP1-204ENST00000477988 LRRN2O75325 713 aa6.68□□□□□ -1.34
NCKAP1-204ENST00000477988 P4HBP07237 508 aaKnown RBP6.68□□□□□ -1.34
NCKAP1-204ENST00000477988 PLCG1P19174 1290 aa6.68□□□□□ -1.34
NCKAP1-204ENST00000477988 IGDCC3Q8IVU1 814 aa6.68□□□□□ -1.34
NCKAP1-204ENST00000477988 ENOX1Q8TC92 643 aaKnown RBP6.68□□□□□ -1.34
NCKAP1-204ENST00000477988 NRDCO43847 1150 aa6.67□□□□□ -1.34
NCKAP1-204ENST00000477988 MAP3K11Q16584 847 aa6.67□□□□□ -1.34
NCKAP1-204ENST00000477988 RNF111Q6ZNA4 994 aa6.67□□□□□ -1.34
NCKAP1-204ENST00000477988 KREMEN1Q96MU8 473 aa6.67□□□□□ -1.34
NCKAP1-204ENST00000477988 PALD1Q9ULE6 856 aa6.67□□□□□ -1.34
NCKAP1-204ENST00000477988 CORINQ9Y5Q5 1042 aa6.67□□□□□ -1.34
NCKAP1-204ENST00000477988 K7ESM1 405 aa6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 PRPF40AO75400 957 aaKnown RBP6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 KIR2DL1P43626 348 aaPredicted RBP6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 KIR2DL2P43627 348 aaPredicted RBP6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 CAP1Q01518 475 aa6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 CLEC16AQ2KHT3 1053 aa6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 JARID2Q92833 1246 aaPredicted RBP6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 VWCEQ96DN2 955 aa6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 PWWP2AQ96N64 755 aa6.66□□□□□ -1.34
NCKAP1-204ENST00000477988 SHISA3A0PJX4 238 aa6.65□□□□□ -1.34
NCKAP1-204ENST00000477988 ABLIM1O14639 778 aa6.65□□□□□ -1.34
NCKAP1-204ENST00000477988 TNNI2P48788 182 aa6.65□□□□□ -1.34
NCKAP1-204ENST00000477988 OLFML2BQ68BL8 750 aa6.65□□□□□ -1.34
NCKAP1-204ENST00000477988 LDHDQ86WU2 507 aa6.65□□□□□ -1.34
NCKAP1-204ENST00000477988 CCDC74BQ96LY2 380 aa6.65□□□□□ -1.34
NCKAP1-204ENST00000477988 NOC4LQ9BVI4 516 aaKnown RBP6.65□□□□□ -1.34
NCKAP1-204ENST00000477988 ASCC2Q9H1I8 757 aaPredicted RBP6.65□□□□□ -1.34
NCKAP1-204ENST00000477988 PRR36Q9H6K5 1346 aa6.65□□□□□ -1.35
NCKAP1-204ENST00000477988 MATN3O15232 486 aa6.64□□□□□ -1.35
NCKAP1-204ENST00000477988 USP2O75604 605 aaPredicted RBP6.64□□□□□ -1.35
NCKAP1-204ENST00000477988 BPNT1O95861 308 aa6.64□□□□□ -1.35
NCKAP1-204ENST00000477988 PNLIPP16233 465 aa6.64□□□□□ -1.35
NCKAP1-204ENST00000477988 MAGEA10P43363 369 aaPredicted RBP6.64□□□□□ -1.35
NCKAP1-204ENST00000477988 ERVFRD-1P60508 538 aa6.64□□□□□ -1.35
NCKAP1-204ENST00000477988 ZNF827Q17R98 1081 aa6.64□□□□□ -1.35
NCKAP1-204ENST00000477988 SYTL5Q8TDW5 730 aaPredicted RBP6.64□□□□□ -1.35
NCKAP1-204ENST00000477988 FFAR3O14843 346 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 SDHBP21912 280 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 KCNC1P48547 511 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 SLURP1P55000 103 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 SLC14A2Q15849 920 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 C14orf37Q86TY3 774 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 SLC16A11Q8NCK7 471 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 KLHL14Q9P2G3 628 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 TLR6Q9Y2C9 796 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 PCDHA5Q9Y5H7 936 aa6.63□□□□□ -1.35
NCKAP1-204ENST00000477988 RPL10P27635 214 aaKnown RBP6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 ST13P50502 369 aaKnown RBP6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 ADAM17P78536 824 aa6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 USHBP1Q8N6Y0 703 aa6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 DAGLBQ8NCG7 672 aa6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 PHC3Q8NDX5 983 aa6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 MAP6Q96JE9 813 aa6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 SRRDQ9UH36 339 aa6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 ZMYM5Q9UJ78 669 aa6.62□□□□□ -1.35
NCKAP1-204ENST00000477988 FAM221AA4D161 298 aa6.61□□□□□ -1.35
NCKAP1-204ENST00000477988 NMIQ13287 307 aaPredicted RBP6.61□□□□□ -1.35
NCKAP1-204ENST00000477988 WAPLQ7Z5K2 1190 aa6.61□□□□□ -1.35
NCKAP1-204ENST00000477988 GATAD2BQ8WXI9 593 aa6.61□□□□□ -1.35
NCKAP1-204ENST00000477988 SORCS2Q96PQ0 1159 aa6.61□□□□□ -1.35
NCKAP1-204ENST00000477988 ARID3AQ99856 593 aa6.61□□□□□ -1.35
NCKAP1-204ENST00000477988 HDAC8Q9BY41 377 aa6.61□□□□□ -1.35
NCKAP1-204ENST00000477988 REV1Q9UBZ9 1251 aa6.61□□□□□ -1.35
NCKAP1-204ENST00000477988 CHURC1-FNTBB4DL54 471 aa6.6□□□□□ -1.35
NCKAP1-204ENST00000477988 CHMP4BP1P59074 171 aa6.6□□□□□ -1.35
NCKAP1-204ENST00000477988 LMNB2Q03252 620 aa6.6□□□□□ -1.35
NCKAP1-204ENST00000477988 TAF1CQ15572 869 aaPredicted RBP6.6□□□□□ -1.35
NCKAP1-204ENST00000477988 UBXN11Q5T124 520 aa6.6□□□□□ -1.35
NCKAP1-204ENST00000477988 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
NCKAP1-204ENST00000477988 ZNF655Q8N720 491 aaPredicted RBP6.6□□□□□ -1.35
NCKAP1-204ENST00000477988 BUB1BO60566 1050 aaPredicted RBP6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 PCBP3P57721 371 aaKnown RBP6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 RNF4P78317 190 aa6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 MEI1Q5TIA1 1274 aa6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 BNC2Q6ZN30 1099 aaPredicted RBP6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 PHACTR4Q8IZ21 702 aa6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 LINC00116Q8NCU8 138 aa6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 HHIPL1Q96JK4 782 aa6.59□□□□□ -1.35
NCKAP1-204ENST00000477988 PLCD4Q9BRC7 762 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms