RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 NSD3Q9BZ95 1437 aa6.4□□□□□ -1.39
CKS1B-207ENST00000477676 SCN11AQ9UI33 1791 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 SOX1O00570 391 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-207ENST00000477676 TNFRSF10BO14763 440 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 TRPA1O75762 1119 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 PLCL1Q15111 1095 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 KSR1Q8IVT5 923 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 C2CD4AQ8NCU7 369 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-207ENST00000477676 FLAD1Q8NFF5 587 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 BCL7CQ8WUZ0 217 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-207ENST00000477676 EZH1Q92800 747 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-207ENST00000477676 PBXIP1Q96AQ6 731 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 ELP3Q9H9T3 547 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 KANSL3Q9P2N6 904 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 SALL4Q9UJQ4 1053 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 SERPINA10Q9UK55 444 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 ZMIZ1Q9ULJ6 1067 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 SOX13Q9UN79 622 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 MTMR7Q9Y216 660 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 KIF24Q5T7B8 1368 aa6.39□□□□□ -1.39
CKS1B-207ENST00000477676 SMG6Q86US8 1419 aaKnown RBP6.39□□□□□ -1.39
CKS1B-207ENST00000477676 LOC100289279A0A1B0GTE1 492 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 PDE2AO00408 941 aaPredicted RBP6.38□□□□□ -1.39
CKS1B-207ENST00000477676 ZNF865P0CJ78 1059 aaPredicted RBP6.38□□□□□ -1.39
CKS1B-207ENST00000477676 KCNA3P22001 575 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 CES1P23141 567 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 SSFA2P28290 1259 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 ALKBH2Q6NS38 261 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 ZNF574Q6ZN55 896 aaPredicted RBP6.38□□□□□ -1.39
CKS1B-207ENST00000477676 SPRED2Q7Z698 418 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 STK32AQ8WU08 396 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 SMARCC1Q92922 1105 aaPredicted RBP6.38□□□□□ -1.39
CKS1B-207ENST00000477676 HHIPQ96QV1 700 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 USP26Q9BXU7 913 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 CNTN3Q9P232 1028 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 SLC5A6Q9Y289 635 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 C10orf71Q711Q0 1435 aa6.38□□□□□ -1.39
CKS1B-207ENST00000477676 DLEC1Q9Y238 1755 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 KDM6AO15550 1401 aaPredicted RBP6.37□□□□□ -1.39
CKS1B-207ENST00000477676 WASHC2AQ641Q2 1341 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.37□□□□□ -1.39
CKS1B-207ENST00000477676 A0A0G2JLW4 131 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 MMP10P09238 476 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 PHKG2P15735 406 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 EXOSC6Q5RKV6 272 aaKnown RBP6.37□□□□□ -1.39
CKS1B-207ENST00000477676 TMEM164Q5U3C3 297 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 WFDC3Q8IUB2 231 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 NMRK2Q9NPI5 230 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 TMEM63CQ9P1W3 806 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 POLKQ9UBT6 870 aa6.37□□□□□ -1.39
CKS1B-207ENST00000477676 DICER1Q9UPY3 1922 aaKnown RBP6.37□□□□□ -1.39
CKS1B-207ENST00000477676 GYS1P13807 737 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 DPEP1P16444 411 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 ATP2B4P23634 1241 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 TMF1P82094 1093 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 HTRA3P83110 453 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 SOX4Q06945 474 aaPredicted RBP6.36□□□□□ -1.39
CKS1B-207ENST00000477676 AAMPQ13685 434 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 EIF4A2Q14240 407 aaKnown RBP6.36□□□□□ -1.39
CKS1B-207ENST00000477676 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 ZNF765Q7L2R6 523 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 FAM168AQ92567 244 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 YIPF2Q9BWQ6 316 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 TMOD3Q9NYL9 352 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 CACNA1SQ13698 1873 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 ANKRD31Q8N7Z5 1873 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 NRXN2Q9P2S2 1712 aa6.36□□□□□ -1.39
CKS1B-207ENST00000477676 TNRC6CQ9HCJ0 1690 aaKnown RBP6.36□□□□□ -1.39
CKS1B-207ENST00000477676 ZBTB39O15060 712 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
CKS1B-207ENST00000477676 USP5P45974 858 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 CYP27A1Q02318 531 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 IKBKEQ14164 716 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 C8orf34Q49A92 452 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 NOM1Q5C9Z4 860 aaKnown RBP6.35□□□□□ -1.39
CKS1B-207ENST00000477676 XKR5Q6UX68 686 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 CAPN12Q6ZSI9 719 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 VN1R5Q7Z5H4 357 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 ATG4DQ86TL0 474 aaPredicted RBP6.35□□□□□ -1.39
CKS1B-207ENST00000477676 IFNL2Q8IZJ0 200 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 TMEM40Q8WWA1 233 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 SPG7Q9UQ90 795 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 KCPQ6ZWJ8 1503 aa6.35□□□□□ -1.39
CKS1B-207ENST00000477676 TIAM2Q8IVF5 1701 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 NFICP08651 508 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 PRELPP51888 382 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 TGFB2P61812 414 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 DNM1Q05193 864 aaKnown RBP6.34□□□□□ -1.39
CKS1B-207ENST00000477676 DDR1Q08345 913 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 EHHADHQ08426 723 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 BNIP3Q12983 259 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 ARHGAP27Q6ZUM4 889 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 AEBP1Q8IUX7 1158 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 C1orf127Q8N9H9 656 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 GLIS3Q8NEA6 775 aa6.34□□□□□ -1.39
CKS1B-207ENST00000477676 SLC38A3Q99624 504 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms