RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ORC2Q13416 577 aaPredicted RBP9.11□□□□□ -0.95
VMA21-203ENST00000477649 SNW1Q13573 536 aaKnown RBP9.11□□□□□ -0.95
VMA21-203ENST00000477649 ZRSR1Q15695 479 aaKnown RBP9.11□□□□□ -0.95
VMA21-203ENST00000477649 FKBP1CQ5VVH2 108 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 KANK3Q6NY19 840 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 METTL16Q86W50 562 aaKnown RBP9.11□□□□□ -0.95
VMA21-203ENST00000477649 FMR1NBQ8N0W7 255 aaPredicted RBP9.11□□□□□ -0.95
VMA21-203ENST00000477649 SRBD1Q8N5C6 995 aaKnown RBP9.11□□□□□ -0.95
VMA21-203ENST00000477649 FAM200AQ8TCP9 573 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 PDLIM2Q96JY6 352 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 AIFM3Q96NN9 605 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 TRIM34Q9BYJ4 488 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 MTFR1LQ9H019 292 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 ANO10Q9NW15 660 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 MTMR4Q9NYA4 1195 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 PIM2Q9P1W9 311 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 USP25Q9UHP3 1055 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 MYH15Q9Y2K3 1946 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 ATRNL1Q5VV63 1379 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 ESYT2A0FGR8 921 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 F8W031 263 aaPredicted RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 SMIM22K7EJ46 135 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 NMT2O60551 498 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 VIL1P09327 827 aaKnown RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 PTPREP23469 700 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 GNA11P29992 359 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 GUCY1A2P33402 732 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 NLRP5P59047 1200 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 TYRO3Q06418 890 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 STX1AQ16623 288 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 AOC3Q16853 763 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 GPATCH4Q5T3I0 446 aaKnown RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 RSBN1LQ6PCB5 846 aaPredicted RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 DEFB132Q7Z7B7 95 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 SLC51AQ86UW1 340 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 CCDC82Q8N4S0 544 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 OGFOD1Q8N543 542 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 MTMR14Q8NCE2 650 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 AGBL3Q8NEM8 1001 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 RRP36Q96EU6 259 aaKnown RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 SDF4Q9BRK5 362 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 GLT8D2Q9H1C3 349 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 KANSL2Q9H9L4 492 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 SEC63Q9UGP8 760 aaKnown RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 MAD2L2Q9UI95 211 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 HERC5Q9UII4 1024 aaKnown RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 SRPRBQ9Y5M8 271 aaKnown RBP9.1□□□□□ -0.95
VMA21-203ENST00000477649 FOCADQ5VW36 1801 aa9.1□□□□□ -0.95
VMA21-203ENST00000477649 KLRF2D3W0D1 207 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 LAD1O00515 517 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 C21orf2O43822 256 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 PPFIA3O75145 1194 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 TPM3P06753 285 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 SNHG28P0DPA3 235 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 SYKP43405 635 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 SCNN1DP51172 638 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 RBM5P52756 815 aaKnown RBP eCLIP9.09□□□□□ -0.95
VMA21-203ENST00000477649 TRAF1Q13077 416 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 PICALMQ13492 652 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 RESP18Q5W5W9 173 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 ARL6IP4Q66PJ3 421 aaKnown RBP9.09□□□□□ -0.95
VMA21-203ENST00000477649 MCTP2Q6DN12 878 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 PPP1R18Q6NYC8 613 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 OLFM4Q6UX06 510 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 KIAA0825Q8IV33 1275 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 NIM1KQ8IY84 436 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 BLIDQ8IZY5 108 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 LARGE2Q8N3Y3 721 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 SLC44A5Q8NCS7 719 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 TNFRSF25Q93038 417 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 MKL1Q969V6 931 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 CEP95Q96GE4 821 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 PANK2Q9BZ23 570 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 GJB4Q9NTQ9 266 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 BARHL2Q9NY43 387 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 VPS54Q9P1Q0 977 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 NYAP2Q9P242 653 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 PCDHA4Q9UN74 947 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 KCNJ14Q9UNX9 436 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 HPSEQ9Y251 543 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 CD2APQ9Y5K6 639 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 SLX4Q8IY92 1834 aa9.09□□□□□ -0.95
VMA21-203ENST00000477649 ZNF202O95125 648 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 PFKFB1P16118 471 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 DPEP1P16444 411 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 KCNA3P22001 575 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 TOB1P50616 345 aaPredicted RBP9.08□□□□□ -0.96
VMA21-203ENST00000477649 NDUFA8P51970 172 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 DALRD3Q5D0E6 543 aaKnown RBP9.08□□□□□ -0.96
VMA21-203ENST00000477649 TATDN1Q6P1N9 297 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 TMEM179Q6ZVK1 233 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 CEP57L1Q8IYX8 460 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 FAM212AQ96EL1 285 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 BPIFA3Q9BQP9 254 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 FTOQ9C0B1 505 aaKnown RBP eCLIP9.08□□□□□ -0.96
VMA21-203ENST00000477649 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
VMA21-203ENST00000477649 GOLPH3LQ9H4A5 285 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms