RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 KRT1P04264 644 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 BUD31P41223 144 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-212ENST00000477520 MFAP1P55081 439 aaKnown RBP5.71□□□□□ -1.5
PTCD3-212ENST00000477520 EHHADHQ08426 723 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 KIAA2012Q0VF49 1180 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 CHAF1AQ13111 956 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-212ENST00000477520 IDI1Q13907 227 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 KCNMB1Q16558 191 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 ECM1Q16610 540 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 FYB2Q5VWT5 728 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 ALKBH2Q6NS38 261 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 GALNT12Q8IXK2 581 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 DUSP23Q9BVJ7 150 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 CCDC86Q9H6F5 360 aaKnown RBP5.71□□□□□ -1.5
PTCD3-212ENST00000477520 MKNK2Q9HBH9 465 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 DISC1Q9NRI5 854 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 FAM53CQ9NYF3 392 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 LMCD1Q9NZU5 365 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 A2ML1A8K2U0 1454 aa5.71□□□□□ -1.5
PTCD3-212ENST00000477520 B8ZZF3 427 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 TULP2O00295 520 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 NPR3P17342 541 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 DDIT3P35638 169 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 RAB3GAP1Q15042 981 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 USPL1Q5W0Q7 1092 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 SMYD4Q8IYR2 804 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-212ENST00000477520 GJD3Q8N144 294 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTCD3-212ENST00000477520 ZNF830Q96NB3 372 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-212ENST00000477520 ZC3H12CQ9C0D7 883 aaKnown RBP5.7□□□□□ -1.5
PTCD3-212ENST00000477520 TNKS2Q9H2K2 1166 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 PIDD1Q9HB75 910 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 CCDC87Q9NVE4 849 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 EID1Q9Y6B2 187 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 SYNMO15061 1565 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 RPGRIP1LQ68CZ1 1315 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 PLA2R1Q13018 1463 aa5.7□□□□□ -1.5
PTCD3-212ENST00000477520 KDM5AP29375 1690 aaKnown RBP5.69□□□□□ -1.5
PTCD3-212ENST00000477520 PARD3Q8TEW0 1356 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 TMEM265A0A087WTH1 108 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 ZNF862O60290 1169 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-212ENST00000477520 ITIH2P19823 946 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 USP5P45974 858 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 TTLL4Q14679 1199 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 RGL3Q3MIN7 710 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 PRR23BQ6ZRT6 265 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 TTLL10Q6ZVT0 673 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 SYDE1Q6ZW31 735 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-212ENST00000477520 ZNF771Q7L3S4 317 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-212ENST00000477520 FAM184AQ8NB25 1140 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 ZSCAN18Q8TBC5 510 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-212ENST00000477520 GZF1Q9H116 711 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-212ENST00000477520 ATXN3LQ9H3M9 355 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 BRMS1Q9HCU9 246 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 CTNND2Q9UQB3 1225 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 PCDHGC5Q9Y5F6 944 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 PIK3C2BO00750 1634 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 CLTCL1P53675 1640 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 RAD50Q92878 1312 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 KIF16BQ96L93 1317 aa5.69□□□□□ -1.5
PTCD3-212ENST00000477520 NPC1L1Q9UHC9 1359 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 NEURL4Q96JN8 1562 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 UGGT1Q9NYU2 1555 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 CEP170BQ9Y4F5 1589 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-212ENST00000477520 MYO3AQ8NEV4 1616 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 HCLS1P14317 486 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-212ENST00000477520 ITPKAP23677 461 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 NUCB2P80303 420 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 ID3Q02535 119 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 ARHGAP27Q6ZUM4 889 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 ANKLE2Q86XL3 938 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 SIAH1Q8IUQ4 282 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 DDX54Q8TDD1 881 aaKnown RBP5.68□□□□□ -1.5
PTCD3-212ENST00000477520 HEXIM2Q96MH2 286 aaKnown RBP5.68□□□□□ -1.5
PTCD3-212ENST00000477520 ZNF142P52746 1687 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-212ENST00000477520 ADGRB3O60242 1522 aa5.68□□□□□ -1.5
PTCD3-212ENST00000477520 RNGTTO60942 597 aaKnown RBP5.67□□□□□ -1.5
PTCD3-212ENST00000477520 APPP05067 770 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 C1QTNF9P0C862 333 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 AP3B2Q13367 1082 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 KIAA0319Q5VV43 1072 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 CAVIN1Q6NZI2 390 aaKnown RBP5.67□□□□□ -1.5
PTCD3-212ENST00000477520 RPAINQ86UA6 219 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 TOP6BLQ8N6T0 577 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 PIBF1Q8WXW3 757 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 ANKRD7Q92527 254 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 SECISBP2LQ93073 1101 aaKnown RBP5.67□□□□□ -1.5
PTCD3-212ENST00000477520 PPP1R16BQ96T49 567 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 C22orf23Q9BZE7 217 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 RWDD1Q9H446 243 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-212ENST00000477520 CWC22Q9HCG8 908 aaKnown RBP5.67□□□□□ -1.5
PTCD3-212ENST00000477520 CGNQ9P2M7 1197 aaKnown RBP5.67□□□□□ -1.5
PTCD3-212ENST00000477520 TMEM2Q9UHN6 1383 aa5.67□□□□□ -1.5
PTCD3-212ENST00000477520 TMEM131LA2VDJ0 1609 aa5.66□□□□□ -1.5
PTCD3-212ENST00000477520 RIMS2Q9UQ26 1411 aa5.66□□□□□ -1.5
PTCD3-212ENST00000477520 UBR1Q8IWV7 1749 aa5.66□□□□□ -1.5
PTCD3-212ENST00000477520 GOLGA6L6A8MZA4 724 aa5.66□□□□□ -1.5
PTCD3-212ENST00000477520 MBD3O95983 291 aa5.66□□□□□ -1.5
PTCD3-212ENST00000477520 CALRP27797 417 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms