RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 TMEM132BQ14DG7 1078 aa18.5■□□□□ 0.55
COMMD6-209ENST00000477377 CCL14Q16627 93 aa18.5■□□□□ 0.55
COMMD6-209ENST00000477377 TTC22Q5TAA0 569 aa18.5■□□□□ 0.55
COMMD6-209ENST00000477377 MAP3K21Q5TCX8 1036 aa18.5■□□□□ 0.55
COMMD6-209ENST00000477377 UBE2Q1Q7Z7E8 422 aa18.5■□□□□ 0.55
COMMD6-209ENST00000477377 SOCS4Q8WXH5 440 aa18.5■□□□□ 0.55
COMMD6-209ENST00000477377 SPATC1LQ9H0A9 340 aa18.5■□□□□ 0.55
COMMD6-209ENST00000477377 GOPCQ9HD26 462 aa18.5■□□□□ 0.55
COMMD6-209ENST00000477377 BIN2Q9UBW5 565 aaPredicted RBP18.5■□□□□ 0.55
COMMD6-209ENST00000477377 ORC4O43929 436 aa18.49■□□□□ 0.55
COMMD6-209ENST00000477377 NMT2O60551 498 aa18.49■□□□□ 0.55
COMMD6-209ENST00000477377 TTLL1O95922 423 aa18.49■□□□□ 0.55
COMMD6-209ENST00000477377 CCNA1P78396 465 aa18.49■□□□□ 0.55
COMMD6-209ENST00000477377 GRB14Q14449 540 aa18.49■□□□□ 0.55
COMMD6-209ENST00000477377 CWC27Q6UX04 472 aaKnown RBP18.49■□□□□ 0.55
COMMD6-209ENST00000477377 FLRT1Q9NZU1 646 aa18.49■□□□□ 0.55
COMMD6-209ENST00000477377 PPP1R9AQ9ULJ8 1098 aa18.49■□□□□ 0.55
COMMD6-209ENST00000477377 SYNPO2Q9UMS6 1093 aa18.49■□□□□ 0.55
COMMD6-209ENST00000477377 VWA5AO00534 786 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 SGPL1O95470 568 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 HMGCRP04035 888 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 SLC3A2P08195 630 aaKnown RBP18.48■□□□□ 0.55
COMMD6-209ENST00000477377 TSPY3P0CV98 308 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 TSPY8P0CW00 308 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 ERCC3P19447 782 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 MAP2K5Q13163 448 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 LRRC47Q8N1G4 583 aaKnown RBP18.48■□□□□ 0.55
COMMD6-209ENST00000477377 MB21D1Q8N884 522 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 GMCL1P1Q8NEA9 526 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 SHCBP1Q8NEM2 672 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 NPLOC4Q8TAT6 608 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 U2AF1L4Q8WU68 220 aaKnown RBP18.48■□□□□ 0.55
COMMD6-209ENST00000477377 CRISPLD2Q9H0B8 497 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 ZNF214Q9UL59 606 aaPredicted RBP18.48■□□□□ 0.55
COMMD6-209ENST00000477377 MYH4Q9Y623 1939 aa18.48■□□□□ 0.55
COMMD6-209ENST00000477377 SLC15A5A6NIM6 579 aa18.47■□□□□ 0.55
COMMD6-209ENST00000477377 HOXC6P09630 235 aa18.47■□□□□ 0.55
COMMD6-209ENST00000477377 RGS2P41220 211 aa18.47■□□□□ 0.55
COMMD6-209ENST00000477377 TBC1D10CQ8IV04 446 aa18.47■□□□□ 0.55
COMMD6-209ENST00000477377 COL11A1P12107 1806 aaPredicted RBP18.46■□□□□ 0.55
COMMD6-209ENST00000477377 HAND2P61296 217 aa18.46■□□□□ 0.55
COMMD6-209ENST00000477377 APBA2Q99767 749 aa18.46■□□□□ 0.55
COMMD6-209ENST00000477377 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
COMMD6-209ENST00000477377 TSPY2A6NKD2 308 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 RAD21O60216 631 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 COBLO75128 1261 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 CACNB2Q08289 660 aaPredicted RBP18.45■□□□□ 0.54
COMMD6-209ENST00000477377 SLFN13Q68D06 897 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 CCAR1Q8IX12 1150 aaKnown RBP18.45■□□□□ 0.54
COMMD6-209ENST00000477377 STAG1Q8WVM7 1258 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 DEFB118Q96PH6 123 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 DIAPH3Q9NSV4 1193 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 PDE4DIPQ5VU43 2346 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 RPTORQ8N122 1335 aa18.45■□□□□ 0.54
COMMD6-209ENST00000477377 HIP1O00291 1037 aa18.44■□□□□ 0.54
COMMD6-209ENST00000477377 RANBP6O60518 1105 aaKnown RBP18.44■□□□□ 0.54
COMMD6-209ENST00000477377 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
COMMD6-209ENST00000477377 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
COMMD6-209ENST00000477377 RASGRP2Q7LDG7 609 aa18.44■□□□□ 0.54
COMMD6-209ENST00000477377 RIOX2Q8IUF8 465 aa18.44■□□□□ 0.54
COMMD6-209ENST00000477377 SLF1Q9BQI6 1058 aa18.44■□□□□ 0.54
COMMD6-209ENST00000477377 TCP11L1Q9NUJ3 509 aa18.44■□□□□ 0.54
COMMD6-209ENST00000477377 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
COMMD6-209ENST00000477377 STRNO43815 780 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
COMMD6-209ENST00000477377 ADORA2AP29274 412 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 PLS1Q14651 629 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 AKNAD1Q5T1N1 836 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 WDR78Q5VTH9 848 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 TRMT44Q8IYL2 757 aaKnown RBP18.43■□□□□ 0.54
COMMD6-209ENST00000477377 PRPF38AQ8NAV1 312 aaKnown RBP18.43■□□□□ 0.54
COMMD6-209ENST00000477377 GMCL1Q96IK5 515 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 DSCC1Q9BVC3 393 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 MROH8Q9H579 483 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 ZNF236Q9UL36 1845 aa18.43■□□□□ 0.54
COMMD6-209ENST00000477377 ATP2A1O14983 1001 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 BMP3P12645 472 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 ZKSCAN1P17029 563 aaPredicted RBP18.42■□□□□ 0.54
COMMD6-209ENST00000477377 CHMLP26374 656 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 CCND3P30281 292 aaPredicted RBP18.42■□□□□ 0.54
COMMD6-209ENST00000477377 STAT3P40763 770 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 MFAP1P55081 439 aaKnown RBP18.42■□□□□ 0.54
COMMD6-209ENST00000477377 RCSD1Q6JBY9 416 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 SKAP1Q86WV1 359 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 NCAPG2Q86XI2 1143 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 ABRAQ8N0Z2 381 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 SLC38A10Q9HBR0 1119 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 HMX1Q9NP08 348 aaPredicted RBP18.42■□□□□ 0.54
COMMD6-209ENST00000477377 FEM1BQ9UK73 627 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 NEDD4P46934 1319 aa18.42■□□□□ 0.54
COMMD6-209ENST00000477377 SLC25A27O95847 323 aa18.41■□□□□ 0.54
COMMD6-209ENST00000477377 MCCP23508 829 aa18.41■□□□□ 0.54
COMMD6-209ENST00000477377 RRP12Q5JTH9 1297 aaKnown RBP18.41■□□□□ 0.54
COMMD6-209ENST00000477377 LHX8Q68G74 356 aa18.41■□□□□ 0.54
COMMD6-209ENST00000477377 TRPV1Q8NER1 839 aa18.41■□□□□ 0.54
COMMD6-209ENST00000477377 STX8Q9UNK0 236 aa18.41■□□□□ 0.54
COMMD6-209ENST00000477377 IVNS1ABPQ9Y6Y0 642 aa18.41■□□□□ 0.54
COMMD6-209ENST00000477377 ZNF213O14771 459 aa18.4■□□□□ 0.54
COMMD6-209ENST00000477377 PLA2G6O60733 806 aa18.4■□□□□ 0.54
COMMD6-209ENST00000477377 PCP11498 1178 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms