RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ABRAQ8N0Z2 381 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 RAET1EQ8TD07 263 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 ZNF333Q96JL9 665 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 SLF1Q9BQI6 1058 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 IL25Q9H293 177 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 GJD2Q9UKL4 321 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 STX8Q9UNK0 236 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 PTCH2Q9Y6C5 1203 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 CNMDO75829 334 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 BMP3P12645 472 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 FLT3LGP49771 235 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 HAND2P61296 217 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 PRKCZQ05513 592 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 SLFN13Q68D06 897 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 PLEKHH3Q7Z736 793 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 FAM160B2Q86V87 743 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 CCAR1Q8IX12 1150 aaKnown RBP14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 SPICE1Q8N0Z3 855 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 STK11IPQ8N1F8 1099 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 CHURC1Q8WUH1 139 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 DCAF4Q8WV16 495 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 ESYT1Q9BSJ8 1104 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 MTA3Q9BTC8 594 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 SPATC1LQ9H0A9 340 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 PNMA2Q9UL42 364 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 TACC3Q9Y6A5 838 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 A0A0G2JMZ2 1700 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 LAMA4Q16363 1823 aa14.57□□□□□ -0.08
CLCNKA-205ENST00000477360 SLC15A5A6NIM6 579 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 VWA5AO00534 786 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 EPB41L2O43491 1005 aaKnown RBP14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 CDC45O75419 566 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 HOXC6P09630 235 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 GRK4P32298 578 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 TRDNQ13061 729 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 Q3C1V9 767 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 FAM83BQ5T0W9 1011 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 USP6NLQ92738 828 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 NUDT12Q9BQG2 462 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 PAGR1Q9BTK6 254 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 TOMM22Q9NS69 142 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 BTBD7Q9P203 1132 aa14.56□□□□□ -0.08
CLCNKA-205ENST00000477360 RLFQ13129 1914 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 CCDC85CA6NKD9 419 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 SLC1A4P43007 532 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 STAT2P52630 851 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 UBXN2AP68543 259 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 RRP12Q5JTH9 1297 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 MORN1Q5T089 497 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 GPR142Q7Z601 462 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 RIOX2Q8IUF8 465 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 LRRC47Q8N1G4 583 aaKnown RBP14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 REPS2Q8NFH8 660 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 TEX13BQ9BXU2 312 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 INCENPQ9NQS7 918 aa14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 ZNF214Q9UL59 606 aaPredicted RBP14.55□□□□□ -0.08
CLCNKA-205ENST00000477360 ADCY3O60266 1144 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 CYP21A2P08686 494 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 SNHG28P0DPA3 235 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 PTPREP23469 700 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 RGS2P41220 211 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 PTH1RQ03431 593 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 GRB14Q14449 540 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 GPATCH4Q5T3I0 446 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 BTNL9Q6UXG8 535 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 SKAP1Q86WV1 359 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 ATG4CQ96DT6 458 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 ZSCAN10Q96SZ4 725 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 TMEM47Q9BQJ4 181 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 MOV10L1Q9BXT6 1211 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 LSG1Q9H089 658 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 PORCNQ9H237 461 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 SLC38A10Q9HBR0 1119 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 SLC5A4Q9NY91 659 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 ZSWIM5Q9P217 1185 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 IVNS1ABPQ9Y6Y0 642 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 NEDD4P46934 1319 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 MGAMO43451 1857 aa14.54□□□□□ -0.08
CLCNKA-205ENST00000477360 ZBED4O75132 1171 aa14.53□□□□□ -0.08
CLCNKA-205ENST00000477360 KDM4AO75164 1064 aa14.53□□□□□ -0.08
CLCNKA-205ENST00000477360 STAT3P40763 770 aa14.53□□□□□ -0.08
CLCNKA-205ENST00000477360 TMEM132BQ14DG7 1078 aa14.53□□□□□ -0.08
CLCNKA-205ENST00000477360 MAF1Q9H063 256 aa14.53□□□□□ -0.08
CLCNKA-205ENST00000477360 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
CLCNKA-205ENST00000477360 GABRQQ9UN88 632 aa14.53□□□□□ -0.08
CLCNKA-205ENST00000477360 HTTP42858 3142 aa14.52□□□□□ -0.08
CLCNKA-205ENST00000477360 NMT2O60551 498 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 HMGCRP04035 888 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 MAP2K5Q13163 448 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 SART3Q15020 963 aaKnown RBP14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 NECTIN1Q15223 517 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 RNF20Q5VTR2 975 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 NCOA7Q8NI08 942 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 NKX2-3Q8TAU0 364 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 APBA2Q99767 749 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 UBAC1Q9BSL1 405 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 TMEM106CQ9BVX2 250 aa14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 CWC22Q9HCG8 908 aaKnown RBP14.52□□□□□ -0.09
CLCNKA-205ENST00000477360 FBXO40Q9UH90 709 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms