RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PDE1CQ14123 709 aaPredicted RBP20.5■□□□□ 0.87
VARS2-209ENST00000477288 RPS6KA2Q15349 733 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 ANKFY1Q9P2R3 1169 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 FLOT1O75955 427 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 ITKQ08881 620 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 SCYL2Q6P3W7 929 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 ARPP21Q9UBL0 812 aaPredicted RBP20.5■□□□□ 0.87
VARS2-209ENST00000477288 INPP5BP32019 993 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 RPS6KA1Q15418 735 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 C4orf50Q6ZRC1 276 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 PNMA8AQ86V59 439 aaPredicted RBP20.49■□□□□ 0.87
VARS2-209ENST00000477288 SYCE1Q8N0S2 351 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 DOK7Q18PE1 504 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 SESTD1Q86VW0 696 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 MMS19Q96T76 1030 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 SCNN1DP51172 638 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 NLRP12P59046 1061 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 KRT81Q14533 505 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 NCAPG2Q86XI2 1143 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 RSAD2Q8WXG1 361 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 GOLGA6BA6NDN3 693 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 RUFY4Q6ZNE9 571 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 ARHGAP24Q8N264 748 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 TYW1BQ6NUM6 668 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 SLF1Q9BQI6 1058 aa20.49■□□□□ 0.87
VARS2-209ENST00000477288 EDC4Q6P2E9 1401 aaKnown RBP20.49■□□□□ 0.87
VARS2-209ENST00000477288 LONRF2Q1L5Z9 754 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 TSNAXIP1Q2TAA8 658 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 ZBTB8OSQ8IWT0 167 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
VARS2-209ENST00000477288 NXNQ6DKJ4 435 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 C2CD5Q86YS7 1000 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 DCPSQ96C86 337 aaKnown RBP20.48■□□□□ 0.87
VARS2-209ENST00000477288 CAPN9O14815 690 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 DTNBO60941 627 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 PPP2R5BQ15173 497 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 IL13P35225 146 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 LIG4P49917 911 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 SEPT10Q9P0V9 454 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 PPME1Q9Y570 386 aa20.48■□□□□ 0.87
VARS2-209ENST00000477288 CLNS1AP54105 237 aaKnown RBP20.47■□□□□ 0.87
VARS2-209ENST00000477288 PRR16Q569H4 304 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.47■□□□□ 0.87
VARS2-209ENST00000477288 GPBP1Q86WP2 473 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 PALM2Q8IXS6 379 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 NLRC4Q9NPP4 1024 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 BABAM1Q9NWV8 329 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 LSM14BQ9BX40 385 aaKnown RBP20.47■□□□□ 0.87
VARS2-209ENST00000477288 NT5C3AQ9H0P0 336 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 FAM207AQ9NSI2 230 aaPredicted RBP20.47■□□□□ 0.87
VARS2-209ENST00000477288 RRAGAQ7L523 313 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 DENND2CQ68D51 928 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 ATP2A3Q93084 1043 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 DACT3Q96B18 629 aaPredicted RBP20.47■□□□□ 0.87
VARS2-209ENST00000477288 KCNG1Q9UIX4 513 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 CTSWP56202 376 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 PAK2Q13177 524 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 MTX1Q13505 466 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 PLCB4Q15147 1175 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 ANKRD20A3Q5VUR7 823 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 TRMT44Q8IYL2 757 aaKnown RBP20.47■□□□□ 0.87
VARS2-209ENST00000477288 U2AF1L4Q8WU68 220 aaKnown RBP20.47■□□□□ 0.87
VARS2-209ENST00000477288 DDX27Q96GQ7 796 aaKnown RBP20.47■□□□□ 0.87
VARS2-209ENST00000477288 PLCB1Q9NQ66 1216 aa20.47■□□□□ 0.87
VARS2-209ENST00000477288 HOXB7P09629 217 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 RBBP5Q15291 538 aaKnown RBP20.46■□□□□ 0.87
VARS2-209ENST00000477288 TRIM50Q86XT4 487 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 ANKRD35Q8N283 1001 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 ZNF853P0CG23 659 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 TUBB2AQ13885 445 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 XKR9Q5GH70 373 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 TUBB2BQ9BVA1 445 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 ATP8A2Q9NTI2 1148 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 RABGAP1Q9Y3P9 1069 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 KDM3AQ9Y4C1 1321 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 TNNC2P02585 160 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 CFAP221Q4G0U5 840 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 KIAA0825Q8IV33 1275 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 CABS1Q96KC9 395 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 A0A1B0GUA9 196 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 NOP9Q86U38 636 aaKnown RBP20.46■□□□□ 0.87
VARS2-209ENST00000477288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.46■□□□□ 0.87
VARS2-209ENST00000477288 KRT12Q99456 494 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 SUGCTQ9HAC7 445 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 NFE2L3Q9Y4A8 694 aa20.46■□□□□ 0.87
VARS2-209ENST00000477288 IGBP1P78318 339 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 ELF2Q15723 593 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 DCAF15Q66K64 600 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 CMTR1Q8N1G2 835 aaKnown RBP20.45■□□□□ 0.86
VARS2-209ENST00000477288 CBX8Q9HC52 389 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 STK38LQ9Y2H1 464 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 POLR2MP0CAP2 368 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 SND1Q7KZF4 910 aaKnown RBP eCLIP20.45■□□□□ 0.86
VARS2-209ENST00000477288 TMTC1Q8IUR5 882 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 LRRC47Q8N1G4 583 aaKnown RBP20.45■□□□□ 0.86
VARS2-209ENST00000477288 PSTPIP2Q9H939 334 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 USP17L12C9JPN9 530 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 USP17L21D6R901 530 aa20.45■□□□□ 0.86
VARS2-209ENST00000477288 ABCB4P21439 1286 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms