RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 RCOR1Q9UKL0 485 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 ZBTB21Q9ULJ3 1066 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 CLIC4Q9Y696 253 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 BAZ2BQ9UIF8 2168 aaKnown RBP16.69■□□□□ 0.26
COL4A6-206ENST00000477085 SMARCA1P28370 1054 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 CAP2P40123 477 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 ECE1P42892 770 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 ASPRV1Q53RT3 343 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 EARS2Q5JPH6 523 aaKnown RBP16.69■□□□□ 0.26
COL4A6-206ENST00000477085 ACER1Q8TDN7 264 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 GPKOWQ92917 476 aaPredicted RBP eCLIP16.69■□□□□ 0.26
COL4A6-206ENST00000477085 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
COL4A6-206ENST00000477085 VAT1LQ9HCJ6 419 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 RBM27Q9P2N5 1060 aaKnown RBP16.69■□□□□ 0.26
COL4A6-206ENST00000477085 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 ELP1O95163 1332 aa16.69■□□□□ 0.26
COL4A6-206ENST00000477085 F5H6K3 240 aa16.68■□□□□ 0.26
COL4A6-206ENST00000477085 KLRC3Q07444 240 aa16.68■□□□□ 0.26
COL4A6-206ENST00000477085 NOM1Q5C9Z4 860 aaKnown RBP16.68■□□□□ 0.26
COL4A6-206ENST00000477085 KIAA1755Q5JYT7 1200 aa16.68■□□□□ 0.26
COL4A6-206ENST00000477085 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
COL4A6-206ENST00000477085 WWC2Q6AWC2 1192 aa16.68■□□□□ 0.26
COL4A6-206ENST00000477085 KCTD1Q719H9 257 aa16.68■□□□□ 0.26
COL4A6-206ENST00000477085 NOSTRINQ8IVI9 506 aa16.68■□□□□ 0.26
COL4A6-206ENST00000477085 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
COL4A6-206ENST00000477085 RTEL1Q9NZ71 1219 aa16.68■□□□□ 0.26
COL4A6-206ENST00000477085 SLC16A2P36021 539 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 TOB1P50616 345 aaPredicted RBP16.67■□□□□ 0.26
COL4A6-206ENST00000477085 UBE2HP62256 183 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 GPR162Q16538 588 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 SLFN13Q68D06 897 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 ATL3Q6DD88 541 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
COL4A6-206ENST00000477085 TNFRSF25Q93038 417 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 ZNF396Q96N95 335 aaPredicted RBP16.67■□□□□ 0.26
COL4A6-206ENST00000477085 PIGSQ96S52 555 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 GGA3Q9NZ52 723 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 MYH15Q9Y2K3 1946 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 MYH6P13533 1939 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 MYH4Q9Y623 1939 aa16.67■□□□□ 0.26
COL4A6-206ENST00000477085 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 STXBP3O00186 592 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 NDUFB10O96000 172 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 NUP88Q99567 741 aaPredicted RBP16.66■□□□□ 0.26
COL4A6-206ENST00000477085 GLIS2Q9BZE0 524 aaPredicted RBP16.66■□□□□ 0.26
COL4A6-206ENST00000477085 XBP1P17861 261 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 SAFBQ15424 915 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL4A6-206ENST00000477085 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
COL4A6-206ENST00000477085 DLK2Q6UY11 383 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 ADGRF4Q8IZF3 695 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 LINC00301Q8NCQ3 95 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 JMJD4Q9H9V9 463 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 BARHL2Q9NY43 387 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 TMEM63CQ9P1W3 806 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 FZD1Q9UP38 647 aa16.66■□□□□ 0.26
COL4A6-206ENST00000477085 KRT2P35908 639 aa16.65■□□□□ 0.26
COL4A6-206ENST00000477085 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
COL4A6-206ENST00000477085 GNL2Q13823 731 aaKnown RBP16.65■□□□□ 0.26
COL4A6-206ENST00000477085 APOBEC3FQ8IUX4 373 aaKnown RBP16.65■□□□□ 0.26
COL4A6-206ENST00000477085 DCAF4Q8WV16 495 aa16.65■□□□□ 0.26
COL4A6-206ENST00000477085 SH3GLB2Q9NR46 395 aa16.65■□□□□ 0.26
COL4A6-206ENST00000477085 ADARB2Q9NS39 739 aaKnown RBP16.65■□□□□ 0.26
COL4A6-206ENST00000477085 POLR3EQ9NVU0 708 aa16.65■□□□□ 0.26
COL4A6-206ENST00000477085 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
COL4A6-206ENST00000477085 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 RAD21O60216 631 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
COL4A6-206ENST00000477085 MBD3O95983 291 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 SLC1A4P43007 532 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 NLRP5P59047 1200 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 CCDC96Q2M329 555 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 GPATCH4Q5T3I0 446 aaKnown RBP16.64■□□□□ 0.25
COL4A6-206ENST00000477085 ANO1Q5XXA6 986 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 MTMR8Q96EF0 704 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 RRP36Q96EU6 259 aaKnown RBP16.64■□□□□ 0.25
COL4A6-206ENST00000477085 GMCL1Q96IK5 515 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 M0R2N6 131 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 PTPAQ15257 358 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
COL4A6-206ENST00000477085 WNT7AO00755 349 aa16.63■□□□□ 0.25
COL4A6-206ENST00000477085 INPP5BP32019 993 aa16.63■□□□□ 0.25
COL4A6-206ENST00000477085 GSE1Q14687 1217 aa16.63■□□□□ 0.25
COL4A6-206ENST00000477085 SF3A1Q15459 793 aaKnown RBP16.63■□□□□ 0.25
COL4A6-206ENST00000477085 ZNF112Q9UJU3 913 aa16.63■□□□□ 0.25
COL4A6-206ENST00000477085 SYNPO2Q9UMS6 1093 aa16.63■□□□□ 0.25
COL4A6-206ENST00000477085 SSC5DA1L4H1 1573 aa16.62■□□□□ 0.25
COL4A6-206ENST00000477085 ASNSP08243 561 aa16.62■□□□□ 0.25
COL4A6-206ENST00000477085 LIG1P18858 919 aa16.62■□□□□ 0.25
COL4A6-206ENST00000477085 LMOD1P29536 600 aaPredicted RBP16.62■□□□□ 0.25
COL4A6-206ENST00000477085 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
COL4A6-206ENST00000477085 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
COL4A6-206ENST00000477085 PCDHA7Q9UN72 937 aa16.62■□□□□ 0.25
COL4A6-206ENST00000477085 CTNND1O60716 968 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms