RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 MAPKAPK5Q8IW41 473 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 WDR63Q8IWG1 891 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 SH3RF3Q8TEJ3 882 aaPredicted RBP9.04□□□□□ -0.96
PRPF3-205ENST00000476970 ZNF384Q8TF68 577 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 HLA-CQ95604 372 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 RPAP3Q9H6T3 665 aaPredicted RBP9.04□□□□□ -0.96
PRPF3-205ENST00000476970 HOXC10Q9NYD6 342 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 CNPY2Q9Y2B0 182 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 AKAP2Q9Y2D5 859 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 YBX2Q9Y2T7 364 aaKnown RBP9.04□□□□□ -0.96
PRPF3-205ENST00000476970 PCDHA11Q9Y5I1 949 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 ZNF318Q5VUA4 2279 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 ELP1O95163 1332 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 PTPRCP08575 1304 aa9.04□□□□□ -0.96
PRPF3-205ENST00000476970 MYH8P13535 1937 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 COL11A1P12107 1806 aaPredicted RBP9.03□□□□□ -0.96
PRPF3-205ENST00000476970 A0A0U1RQG5 324 aaPredicted RBP9.03□□□□□ -0.96
PRPF3-205ENST00000476970 ADAMTS4O75173 837 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 FGBP02675 491 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 ACRP10323 421 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 FCER1AP12319 257 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 COG2Q14746 738 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 SHROOM1Q2M3G4 852 aaPredicted RBP9.03□□□□□ -0.96
PRPF3-205ENST00000476970 NCAPG2Q86XI2 1143 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 PCSK9Q8NBP7 692 aaKnown RBP9.03□□□□□ -0.96
PRPF3-205ENST00000476970 TGFBRAP1Q8WUH2 860 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 UIMC1Q96RL1 719 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 PPP1R12CQ9BZL4 782 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 TANGO6Q9C0B7 1094 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 USP44Q9H0E7 712 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 PRKRIP1Q9H875 184 aaPredicted RBP9.03□□□□□ -0.96
PRPF3-205ENST00000476970 CABP5Q9NP86 173 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 AATFQ9NY61 560 aaKnown RBP eCLIP9.03□□□□□ -0.96
PRPF3-205ENST00000476970 LRP2BPQ9P2M1 347 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 MTCH2Q9Y6C9 303 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 SLC4A7Q9Y6M7 1214 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 SYNRGQ9UMZ2 1314 aa9.03□□□□□ -0.96
PRPF3-205ENST00000476970 ALADP13716 330 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 PLS1Q14651 629 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 GORABQ5T7V8 394 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 NAA16Q6N069 864 aaPredicted RBP9.02□□□□□ -0.97
PRPF3-205ENST00000476970 SPATA5Q8NB90 893 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 XAGE2Q96GT9 111 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 TINF2Q9BSI4 451 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 SPC25Q9HBM1 224 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 HMG20BQ9P0W2 317 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 PALD1Q9ULE6 856 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 HDAC5Q9UQL6 1122 aa9.02□□□□□ -0.97
PRPF3-205ENST00000476970 DIS3Q9Y2L1 958 aaKnown RBP9.02□□□□□ -0.97
PRPF3-205ENST00000476970 COL4A4P53420 1690 aaPredicted RBP9.01□□□□□ -0.97
PRPF3-205ENST00000476970 A0A1B0GUL7 405 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 ARVCFO00192 962 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 IGSF3O75054 1194 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 SLC25A27O95847 323 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 UBTFL1P0CB47 393 aaPredicted RBP9.01□□□□□ -0.97
PRPF3-205ENST00000476970 CST5P28325 142 aaPredicted RBP9.01□□□□□ -0.97
PRPF3-205ENST00000476970 FOXK2Q01167 660 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 DDX10Q13206 875 aaKnown RBP9.01□□□□□ -0.97
PRPF3-205ENST00000476970 KCTD2Q14681 263 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 KCNA10Q16322 511 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 ABCB5Q2M3G0 1257 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 TATDN1Q6P1N9 297 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 CERS3Q8IU89 383 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.974e-22■■■□□ 14.9
PRPF3-205ENST00000476970 VTI1AQ96AJ9 217 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 MMP19Q99542 508 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 EHD4Q9H223 541 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 SERPINB13Q9UIV8 391 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 MCM3APO60318 1980 aa9.01□□□□□ -0.97
PRPF3-205ENST00000476970 WDFY4Q6ZS81 3184 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 NAV1Q8NEY1 1877 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 MYO5AQ9Y4I1 1855 aaKnown RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 ZBBXA8MT70 800 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 ZNF865P0CJ78 1059 aaPredicted RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 ATP2A2P16615 1042 aaKnown RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 ARID4AP29374 1257 aaPredicted RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 CYP2C18P33260 490 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 COPB2P35606 906 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 CDK7P50613 346 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 RABGGTBP53611 331 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 PPP4CP60510 307 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 TIMM10P62072 90 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 CERKLQ49MI3 558 aaPredicted RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 TMEM67Q5HYA8 995 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 TBC1D9Q6ZT07 1266 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 OTOP2Q7RTS6 562 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 FAM126BQ8IXS8 530 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 RPUSD2Q8IZ73 545 aaKnown RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 MSL3Q8N5Y2 521 aaKnown RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 KLHDC9Q8NEP7 349 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 ACER1Q8TDN7 264 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 LENG1Q96BZ8 264 aaPredicted RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 HIPK3Q9H422 1215 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 COPRSQ9NQ92 184 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 SAP30BPQ9UHR5 308 aaKnown RBP9□□□□□ -0.97
PRPF3-205ENST00000476970 FAM184BQ9ULE4 1060 aa9□□□□□ -0.97
PRPF3-205ENST00000476970 DUSP11O75319 330 aaKnown RBP8.99□□□□□ -0.97
PRPF3-205ENST00000476970 FLOT1O75955 427 aa8.99□□□□□ -0.97
PRPF3-205ENST00000476970 ASGR1P07306 291 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms