RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TINF2Q9BSI4 451 aa19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 CRNKL1Q9BZJ0 848 aaKnown RBP19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 TMX2Q9Y320 296 aa19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 ZNF865P0CJ78 1059 aaPredicted RBP19.94■□□□□ 0.78
APOBEC3F-203ENST00000476513 CYP2D6P10635 497 aa19.94■□□□□ 0.78
APOBEC3F-203ENST00000476513 ZNF792Q3KQV3 632 aa19.94■□□□□ 0.78
APOBEC3F-203ENST00000476513 ANKRD33Q7Z3H0 272 aa19.94■□□□□ 0.78
APOBEC3F-203ENST00000476513 LENG1Q96BZ8 264 aaPredicted RBP19.94■□□□□ 0.78
APOBEC3F-203ENST00000476513 TIFAQ96CG3 184 aa19.94■□□□□ 0.78
APOBEC3F-203ENST00000476513 VCPKMTQ9H867 229 aa19.94■□□□□ 0.78
APOBEC3F-203ENST00000476513 ADAMTS4O75173 837 aa19.93■□□□□ 0.78
APOBEC3F-203ENST00000476513 SDR42E1Q8WUS8 393 aa19.93■□□□□ 0.78
APOBEC3F-203ENST00000476513 TOX2Q96NM4 488 aa19.93■□□□□ 0.78
APOBEC3F-203ENST00000476513 ARHGEF10LQ9HCE6 1279 aa19.93■□□□□ 0.78
APOBEC3F-203ENST00000476513 DCP1AQ9NPI6 582 aaPredicted RBP19.93■□□□□ 0.78
APOBEC3F-203ENST00000476513 ADAMTS5Q9UNA0 930 aa19.93■□□□□ 0.78
APOBEC3F-203ENST00000476513 DIS3Q9Y2L1 958 aaKnown RBP19.93■□□□□ 0.78
APOBEC3F-203ENST00000476513 SMCHD1A6NHR9 2005 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 DCDC2CA8MYV0 355 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 WDR46O15213 610 aaKnown RBP19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 AKR1A1P14550 325 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 AKR1B1P15121 316 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 PDE6AP16499 860 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 ACLYP53396 1101 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 ICA1Q05084 483 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 KCTD2Q14681 263 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 SLC9C2Q5TAH2 1124 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 RIOX2Q8IUF8 465 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 DYNLL2Q96FJ2 89 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 TSEN34Q9BSV6 310 aaKnown RBP19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 SH2D4AQ9H788 454 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 SWAP70Q9UH65 585 aa19.92■□□□□ 0.78
APOBEC3F-203ENST00000476513 TIMP1P01033 207 aa19.91■□□□□ 0.78
APOBEC3F-203ENST00000476513 AACSQ86V21 672 aa19.91■□□□□ 0.78
APOBEC3F-203ENST00000476513 STARD7Q9NQZ5 370 aa19.91■□□□□ 0.78
APOBEC3F-203ENST00000476513 FBXO28Q9NVF7 368 aa19.91■□□□□ 0.78
APOBEC3F-203ENST00000476513 NAV1Q8NEY1 1877 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 STAT3P40763 770 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 TTF1Q15361 905 aaPredicted RBP19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 ZKSCAN2Q63HK3 967 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 LCORLQ8N3X6 602 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 NUP133Q8WUM0 1156 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 PPM1EQ8WY54 764 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 TBX21Q9UL17 535 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 CNPY2Q9Y2B0 182 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 SYNRGQ9UMZ2 1314 aa19.9■□□□□ 0.78
APOBEC3F-203ENST00000476513 MOXD2PA6NHM9 499 aa19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 VWA5AO00534 786 aa19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 PBX2P40425 430 aa19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 CCSAPQ6IQ19 270 aaPredicted RBP19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 C16orf59Q7L2K0 433 aa19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 KLHDC9Q8NEP7 349 aa19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 ATXN2LQ8WWM7 1075 aaKnown RBP19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 GAS2L1Q99501 681 aaPredicted RBP19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 ZNF532Q9HCE3 1301 aa19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 RAPGEFL1Q9UHV5 662 aa19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 ZNF214Q9UL59 606 aaPredicted RBP19.89■□□□□ 0.77
APOBEC3F-203ENST00000476513 MUC3AQ02505 3323 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 TCRBV5S4A2TA0A5A2 114 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 GRXCR1A8MXD5 290 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 KCNA10Q16322 511 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 TMEM240Q5SV17 173 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 RASIP1Q5U651 963 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 MFSD5Q6N075 450 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 PBX4Q9BYU1 374 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 PRDM12Q9H4Q4 367 aa19.88■□□□□ 0.77
APOBEC3F-203ENST00000476513 ZNFX1Q9P2E3 1918 aaKnown RBP19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 SMIM22K7EJ46 135 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 PPIGQ13427 754 aaKnown RBP eCLIP19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 AKNAD1Q5T1N1 836 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 CCDC129Q6ZRS4 1044 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 REPS2Q8NFH8 660 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 CCDC17Q96LX7 622 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 ASB2Q96Q27 587 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 ARMT1Q9H993 441 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 FAM184BQ9ULE4 1060 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 PPP1R9AQ9ULJ8 1098 aa19.87■□□□□ 0.77
APOBEC3F-203ENST00000476513 MYADML2A6NDP7 307 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 PRKAB2O43741 272 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 SNAI1O95863 264 aaPredicted RBP19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 EEF2P13639 858 aaKnown RBP19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 COPB2P35606 906 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 CDK8P49336 464 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 CDK7P50613 346 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 CCDC174Q6PII3 467 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 ERC1Q8IUD2 1116 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 MSL3Q8N5Y2 521 aaKnown RBP19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 THEGQ9P2T0 379 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 EXOC6BQ9Y2D4 811 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 PARP14Q460N5 1801 aa19.86■□□□□ 0.77
APOBEC3F-203ENST00000476513 ELP1O95163 1332 aa19.85■□□□□ 0.77
APOBEC3F-203ENST00000476513 GOLIM4O00461 696 aa19.85■□□□□ 0.77
APOBEC3F-203ENST00000476513 CSF2RAP15509 400 aa19.85■□□□□ 0.77
APOBEC3F-203ENST00000476513 IRX5P78411 483 aaPredicted RBP19.85■□□□□ 0.77
APOBEC3F-203ENST00000476513 ADGRE1Q14246 886 aa19.85■□□□□ 0.77
APOBEC3F-203ENST00000476513 FAM83BQ5T0W9 1011 aa19.85■□□□□ 0.77
APOBEC3F-203ENST00000476513 ITPRIPQ8IWB1 547 aa19.85■□□□□ 0.77
APOBEC3F-203ENST00000476513 ADAMTS19Q8TE59 1207 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms