RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 KLF18A0A0U1RQI7 1052 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 A6NJR5 290 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 C6orf229H3BNL8 230 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 SNPHO15079 494 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 GPAA1O43292 621 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 TADA3O75528 432 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 HOXB1P14653 301 aaPredicted RBP7.87□□□□□ -1.15
UBR4-212ENST00000475973 IFNAR1P17181 557 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 CDC27P30260 824 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 ADORA1P30542 326 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 PBX1P40424 430 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 MYL5Q02045 173 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 STK38Q15208 465 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 CCDC158Q5M9N0 1113 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 TAF3Q5VWG9 929 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 MAP1SQ66K74 1059 aaPredicted RBP7.87□□□□□ -1.15
UBR4-212ENST00000475973 TMED8Q6PL24 325 aaPredicted RBP7.87□□□□□ -1.15
UBR4-212ENST00000475973 APOA5Q6Q788 366 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 SH3RF1Q7Z6J0 888 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 METTL16Q86W50 562 aaKnown RBP7.87□□□□□ -1.15
UBR4-212ENST00000475973 KRT222Q8N1A0 295 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 TRIML1Q8N9V2 468 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 ENOX1Q8TC92 643 aaKnown RBP7.87□□□□□ -1.15
UBR4-212ENST00000475973 AIDAQ96BJ3 306 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 SDF4Q9BRK5 362 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 GPRC5DQ9NZD1 345 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 IFNKQ9P0W0 207 aa7.87□□□□□ -1.15
UBR4-212ENST00000475973 COL4A5P29400 1685 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 A0A087WWV3 80 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 VWA3AA6NCI4 1184 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 ARHGAP6O43182 974 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 CBFA2T2O43439 604 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 STX10O60499 249 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 RANBP6O60518 1105 aaKnown RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 PDE8AO60658 829 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 RAD17O75943 681 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 CDKL5O76039 1030 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 EPS15P42566 896 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 MCAMP43121 646 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 ZAP70P43403 619 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 GMPSP49915 693 aaPredicted RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 TOB1P50616 345 aaPredicted RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 CXCL9Q07325 125 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 MORC3Q14149 939 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 MCM6Q14566 821 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 WASHC4Q2M389 1173 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 KRT40Q6A162 431 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 OTUD7BQ6GQQ9 843 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 KRBA2Q6ZNG9 492 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 NUDT18Q6ZVK8 323 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 CYB5R4Q7L1T6 521 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 RSRC2Q7L4I2 434 aaKnown RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 FILIP1Q7Z7B0 1213 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 SLC51AQ86UW1 340 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 VPS37DQ86XT2 251 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 TBC1D10CQ8IV04 446 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 TTLL11Q8NHH1 800 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 DPF2Q92785 391 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 CELF1Q92879 486 aaKnown RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 STRBPQ96SI9 672 aaKnown RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 CDC5LQ99459 802 aaKnown RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 MPHOSPH8Q99549 860 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 LY9Q9HBG7 655 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 ABT1Q9ULW3 272 aaKnown RBP7.86□□□□□ -1.15
UBR4-212ENST00000475973 TACC3Q9Y6A5 838 aa7.86□□□□□ -1.15
UBR4-212ENST00000475973 CACNA1SQ13698 1873 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 RTL9Q8NET4 1388 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 SCN4AP35499 1836 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 NUP98P52948 1817 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 ECM29Q5VYK3 1845 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 ANKRD36CQ5JPF3 1778 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 GOLGA6L9A6NEM1 432 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 LRRC10BA6NIK2 292 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 GOLGA8BA8MQT2 603 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 EFCAB8A8MWE9 144 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 H7C1D1 291 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 ZNF213O14771 459 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 UFL1O94874 794 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 FMNL1O95466 1100 aaPredicted RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 ITGBL1O95965 494 aaPredicted RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 FGRP09769 529 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 ATP1A3P13637 1013 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 SFPQP23246 707 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBR4-212ENST00000475973 RPS12P25398 132 aaKnown RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 ECE1P42892 770 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 SYKP43405 635 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 PLA2G4AP47712 749 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 CLK2P49760 499 aaKnown RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 CTSWP56202 376 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 RPS8P62241 208 aaKnown RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 GUCY1B3Q02153 619 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 CEBPZQ03701 1054 aaKnown RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 BMS1Q14692 1282 aaKnown RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 NR1I3Q14994 352 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 TTF1Q15361 905 aaPredicted RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 SF3A1Q15459 793 aaKnown RBP7.85□□□□□ -1.15
UBR4-212ENST00000475973 CHST3Q7LGC8 479 aa7.85□□□□□ -1.15
UBR4-212ENST00000475973 ANKRD18AQ8IVF6 992 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms