RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
SNX13-207ENST00000475800 KLRC3Q07444 240 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 SPICE1Q8N0Z3 855 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 TRIM47Q96LD4 638 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 UBAC1Q9BSL1 405 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 TANGO6Q9C0B7 1094 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 HOXC10Q9NYD6 342 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 ZSWIM5Q9P217 1185 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 RLFQ13129 1914 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 NDUFB10O96000 172 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 BCRP11274 1271 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 HERVK_113P62684 666 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 COG2Q14746 738 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 SART3Q15020 963 aaKnown RBP17.78■□□□□ 0.44
SNX13-207ENST00000475800 MTFR1Q15390 333 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 FAM110CQ1W6H9 321 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 LBX2Q6XYB7 198 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 LRRC47Q8N1G4 583 aaKnown RBP17.78■□□□□ 0.44
SNX13-207ENST00000475800 ZSCAN10Q96SZ4 725 aaPredicted RBP17.78■□□□□ 0.44
SNX13-207ENST00000475800 P2RX7Q99572 595 aaKnown RBP17.78■□□□□ 0.44
SNX13-207ENST00000475800 BIN2Q9UBW5 565 aaPredicted RBP17.78■□□□□ 0.44
SNX13-207ENST00000475800 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 RBBP6Q7Z6E9 1792 aaKnown RBP17.78■□□□□ 0.44
SNX13-207ENST00000475800 MGAMO43451 1857 aa17.78■□□□□ 0.44
SNX13-207ENST00000475800 KRT32Q14532 448 aa17.77■□□□□ 0.44
SNX13-207ENST00000475800 TSGA10IPQ3SY00 556 aa17.77■□□□□ 0.44
SNX13-207ENST00000475800 KIAA1755Q5JYT7 1200 aa17.77■□□□□ 0.44
SNX13-207ENST00000475800 SLFN13Q68D06 897 aa17.77■□□□□ 0.44
SNX13-207ENST00000475800 RAET1EQ8TD07 263 aa17.77■□□□□ 0.44
SNX13-207ENST00000475800 ANKS1AQ92625 1134 aa17.77■□□□□ 0.44
SNX13-207ENST00000475800 GMCL1Q96IK5 515 aa17.77■□□□□ 0.44
SNX13-207ENST00000475800 MTA3Q9BTC8 594 aa17.77■□□□□ 0.44
SNX13-207ENST00000475800 ERICH2A1L162 156 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 FLOT1O75955 427 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 FAM83BQ5T0W9 1011 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 STOX1Q6ZVD7 989 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 MB21D1Q8N884 522 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 TMEM47Q9BQJ4 181 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 MORF4L1Q9UBU8 362 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 SRRDQ9UH36 339 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 RABGAP1Q9Y3P9 1069 aa17.76■□□□□ 0.43
SNX13-207ENST00000475800 TNKSO95271 1327 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 SPDYE16A6NNV3 312 aaPredicted RBP17.75■□□□□ 0.43
SNX13-207ENST00000475800 GNRH1P01148 92 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 BMP3P12645 472 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 MCCP23508 829 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 DSG3P32926 999 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 HSPA4P34932 840 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 SLC1A4P43007 532 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 RCSD1Q6JBY9 416 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
SNX13-207ENST00000475800 ANKRD13CQ8N6S4 541 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 DCAF4Q8WV16 495 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 ZKSCAN3Q9BRR0 538 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 FEM1BQ9UK73 627 aa17.75■□□□□ 0.43
SNX13-207ENST00000475800 DOCK3Q8IZD9 2030 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 MCM5P33992 734 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 PRKCZQ05513 592 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 CYB5R4Q7L1T6 521 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 ENAHQ8N8S7 591 aaPredicted RBP17.74■□□□□ 0.43
SNX13-207ENST00000475800 GPRC5AQ8NFJ5 357 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 KCNB2Q92953 911 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 KAT14Q9H8E8 782 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 TAF6LQ9Y6J9 622 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 A0A0G2JMZ2 1700 aa17.74■□□□□ 0.43
SNX13-207ENST00000475800 COL11A1P12107 1806 aaPredicted RBP17.73■□□□□ 0.43
SNX13-207ENST00000475800 PLA2G6O60733 806 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 HMGB1P09429 215 aaKnown RBP17.73■□□□□ 0.43
SNX13-207ENST00000475800 FDX1P10109 184 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 HOXD10P28358 340 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 GRK4P32298 578 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 CCNA1P78396 465 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 HABP4Q5JVS0 413 aaKnown RBP17.73■□□□□ 0.43
SNX13-207ENST00000475800 IFIT1BQ5T764 474 aaKnown RBP17.73■□□□□ 0.43
SNX13-207ENST00000475800 FAM160B2Q86V87 743 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 NKX2-3Q8TAU0 364 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 CHURC1Q8WUH1 139 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 SLF1Q9BQI6 1058 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 PPP1R9AQ9ULJ8 1098 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 GABRQQ9UN88 632 aa17.73■□□□□ 0.43
SNX13-207ENST00000475800 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
SNX13-207ENST00000475800 STAT2P52630 851 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 FCGRTP55899 365 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 ERVK-9P63128 1117 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 ERVK-24P63145 666 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 SEC23AQ15436 765 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 PRPF38AQ8NAV1 312 aaKnown RBP17.72■□□□□ 0.43
SNX13-207ENST00000475800 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 NUP88Q99567 741 aaPredicted RBP17.72■□□□□ 0.43
SNX13-207ENST00000475800 PAGR1Q9BTK6 254 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 USP26Q9BXU7 913 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 RBPJLQ9UBG7 517 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 ISY1Q9ULR0 285 aaKnown RBP17.72■□□□□ 0.43
SNX13-207ENST00000475800 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
SNX13-207ENST00000475800 PRMT2P55345 433 aa17.71■□□□□ 0.43
SNX13-207ENST00000475800 WTAPQ15007 396 aa17.71■□□□□ 0.43
SNX13-207ENST00000475800 CCDC96Q2M329 555 aa17.71■□□□□ 0.43
SNX13-207ENST00000475800 GPATCH4Q5T3I0 446 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms