RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 GMCL1P1Q8NEA9 526 aa19.63■□□□□ 0.73
VPS8-222ENST00000475580 SOCS4Q8WXH5 440 aa19.63■□□□□ 0.73
VPS8-222ENST00000475580 TMEM106CQ9BVX2 250 aa19.63■□□□□ 0.73
VPS8-222ENST00000475580 MOV10L1Q9BXT6 1211 aaKnown RBP19.63■□□□□ 0.73
VPS8-222ENST00000475580 PPP1R9AQ9ULJ8 1098 aa19.63■□□□□ 0.73
VPS8-222ENST00000475580 TSPY2A6NKD2 308 aa19.62■□□□□ 0.73
VPS8-222ENST00000475580 CCL5P13501 91 aa19.62■□□□□ 0.73
VPS8-222ENST00000475580 NOVP48745 357 aa19.62■□□□□ 0.73
VPS8-222ENST00000475580 UBXN2AP68543 259 aa19.62■□□□□ 0.73
VPS8-222ENST00000475580 REPS2Q8NFH8 660 aa19.62■□□□□ 0.73
VPS8-222ENST00000475580 NUDT12Q9BQG2 462 aa19.62■□□□□ 0.73
VPS8-222ENST00000475580 DSCC1Q9BVC3 393 aa19.62■□□□□ 0.73
VPS8-222ENST00000475580 SPATC1LQ9H0A9 340 aa19.62■□□□□ 0.73
VPS8-222ENST00000475580 BIN2Q9UBW5 565 aaPredicted RBP19.62■□□□□ 0.73
VPS8-222ENST00000475580 BRCA2P51587 3418 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 RANBP6O60518 1105 aaKnown RBP19.61■□□□□ 0.73
VPS8-222ENST00000475580 CYP2B6P20813 491 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 CHMLP26374 656 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 TRIM32Q13049 653 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 TMEM132BQ14DG7 1078 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 SAMD1Q6SPF0 538 aaPredicted RBP19.61■□□□□ 0.73
VPS8-222ENST00000475580 CENPQQ7L2Z9 268 aaPredicted RBP19.61■□□□□ 0.73
VPS8-222ENST00000475580 SKAP1Q86WV1 359 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 CCAR1Q8IX12 1150 aaKnown RBP19.61■□□□□ 0.73
VPS8-222ENST00000475580 STAG1Q8WVM7 1258 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 TRIB2Q92519 343 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 SHISA4Q96DD7 197 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 UNC93B1Q9H1C4 597 aa19.61■□□□□ 0.73
VPS8-222ENST00000475580 VWA5AO00534 786 aa19.6■□□□□ 0.73
VPS8-222ENST00000475580 XRCC5P13010 732 aaKnown RBP19.6■□□□□ 0.73
VPS8-222ENST00000475580 PTPREP23469 700 aa19.6■□□□□ 0.73
VPS8-222ENST00000475580 GRB14Q14449 540 aa19.6■□□□□ 0.73
VPS8-222ENST00000475580 AKNAD1Q5T1N1 836 aa19.6■□□□□ 0.73
VPS8-222ENST00000475580 SHCBP1Q8NEM2 672 aa19.6■□□□□ 0.73
VPS8-222ENST00000475580 ZNF236Q9UL36 1845 aa19.6■□□□□ 0.73
VPS8-222ENST00000475580 NEDD4P46934 1319 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 RAD50Q92878 1312 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 SLC15A5A6NIM6 579 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 HMGCRP04035 888 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 ERCC3P19447 782 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 RGS2P41220 211 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 MAP2K5Q13163 448 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 RRP12Q5JTH9 1297 aaKnown RBP19.59■□□□□ 0.73
VPS8-222ENST00000475580 SLFN13Q68D06 897 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 SLF1Q9BQI6 1058 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 RNF208Q9H0X6 261 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 ZNF214Q9UL59 606 aaPredicted RBP19.59■□□□□ 0.73
VPS8-222ENST00000475580 STX8Q9UNK0 236 aa19.59■□□□□ 0.73
VPS8-222ENST00000475580 TNRC18O15417 2968 aaPredicted RBP19.59■□□□□ 0.73
VPS8-222ENST00000475580 GJB1P08034 283 aa19.58■□□□□ 0.72
VPS8-222ENST00000475580 PCP11498 1178 aaKnown RBP19.58■□□□□ 0.72
VPS8-222ENST00000475580 PLS1Q14651 629 aa19.58■□□□□ 0.72
VPS8-222ENST00000475580 CCL14Q16627 93 aa19.58■□□□□ 0.72
VPS8-222ENST00000475580 WDR78Q5VTH9 848 aa19.58■□□□□ 0.72
VPS8-222ENST00000475580 MFSD6Q6ZSS7 791 aa19.58■□□□□ 0.72
VPS8-222ENST00000475580 APBA2Q99767 749 aa19.58■□□□□ 0.72
VPS8-222ENST00000475580 TOMM22Q9NS69 142 aa19.58■□□□□ 0.72
VPS8-222ENST00000475580 TCP11L1Q9NUJ3 509 aa19.58■□□□□ 0.72
VPS8-222ENST00000475580 ZNF213O14771 459 aa19.57■□□□□ 0.72
VPS8-222ENST00000475580 PPP4R3BQ5MIZ7 849 aa19.57■□□□□ 0.72
VPS8-222ENST00000475580 MAP3K21Q5TCX8 1036 aa19.57■□□□□ 0.72
VPS8-222ENST00000475580 RASGRP2Q7LDG7 609 aa19.57■□□□□ 0.72
VPS8-222ENST00000475580 GMCL1Q96IK5 515 aa19.57■□□□□ 0.72
VPS8-222ENST00000475580 CWC22Q9HCG8 908 aaKnown RBP19.57■□□□□ 0.72
VPS8-222ENST00000475580 PAK6Q9NQU5 681 aaPredicted RBP19.57■□□□□ 0.72
VPS8-222ENST00000475580 HOXC6P09630 235 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 BMP3P12645 472 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 GJA8P48165 433 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 NCAPG2Q86XI2 1143 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 RIOX2Q8IUF8 465 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 PRPF38AQ8NAV1 312 aaKnown RBP19.56■□□□□ 0.72
VPS8-222ENST00000475580 NPLOC4Q8TAT6 608 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 RNF41Q9H4P4 317 aaPredicted RBP19.56■□□□□ 0.72
VPS8-222ENST00000475580 MROH8Q9H579 483 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 FLRT1Q9NZU1 646 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 FEM1BQ9UK73 627 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 IVNS1ABPQ9Y6Y0 642 aa19.56■□□□□ 0.72
VPS8-222ENST00000475580 SGSM2O43147 1006 aa19.55■□□□□ 0.72
VPS8-222ENST00000475580 IGHA2P01877 340 aa19.55■□□□□ 0.72
VPS8-222ENST00000475580 ZKSCAN1P17029 563 aaPredicted RBP19.55■□□□□ 0.72
VPS8-222ENST00000475580 MCCP23508 829 aa19.55■□□□□ 0.72
VPS8-222ENST00000475580 STAT3P40763 770 aa19.55■□□□□ 0.72
VPS8-222ENST00000475580 PTH1RQ03431 593 aa19.55■□□□□ 0.72
VPS8-222ENST00000475580 RCSD1Q6JBY9 416 aa19.55■□□□□ 0.72
VPS8-222ENST00000475580 TRMT44Q8IYL2 757 aaKnown RBP19.55■□□□□ 0.72
VPS8-222ENST00000475580 U2AF1L4Q8WU68 220 aaKnown RBP19.55■□□□□ 0.72
VPS8-222ENST00000475580 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.55■□□□□ 0.72
VPS8-222ENST00000475580 TMEM232C9JQI7 657 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 STRNO43815 780 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 SLC25A27O95847 323 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 ADORA2AP29274 412 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 SLC1A4P43007 532 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 IMMTQ16891 758 aaKnown RBP19.54■□□□□ 0.72
VPS8-222ENST00000475580 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 KIFC2Q96AC6 838 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 CHMP4CQ96CF2 233 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 TMEM47Q9BQJ4 181 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 SLC38A10Q9HBR0 1119 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 CTNNA3Q9UI47 895 aa19.54■□□□□ 0.72
VPS8-222ENST00000475580 PDE4DIPQ5VU43 2346 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms