RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RGS2P41220 211 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 MAP2K5Q13163 448 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 SHCBP1Q8NEM2 672 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 MKL1Q969V6 931 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 ESYT1Q9BSJ8 1104 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.51■□□□□ 0.55
CPSF3-203ENST00000475482 ZNF287Q9HBT7 754 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 HELLSQ9NRZ9 838 aa18.51■□□□□ 0.55
CPSF3-203ENST00000475482 RAD50Q92878 1312 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 PPARAQ07869 468 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 GRB14Q14449 540 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 ALX1Q15699 326 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 CCAR1Q8IX12 1150 aaKnown RBP18.5■□□□□ 0.55
CPSF3-203ENST00000475482 DEFB118Q96PH6 123 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 APBA2Q99767 749 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 MOV10L1Q9BXT6 1211 aaKnown RBP18.5■□□□□ 0.55
CPSF3-203ENST00000475482 C22orf23Q9BZE7 217 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 SPATC1LQ9H0A9 340 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 NAPBQ9H115 298 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 GOPCQ9HD26 462 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 SYNPO2Q9UMS6 1093 aa18.5■□□□□ 0.55
CPSF3-203ENST00000475482 ZNFX1Q9P2E3 1918 aaKnown RBP18.5■□□□□ 0.55
CPSF3-203ENST00000475482 PRDM1O75626 825 aa18.49■□□□□ 0.55
CPSF3-203ENST00000475482 FLOT1O75955 427 aa18.49■□□□□ 0.55
CPSF3-203ENST00000475482 KIAA1211Q6ZU35 1233 aa18.49■□□□□ 0.55
CPSF3-203ENST00000475482 ZNF444Q8N0Y2 327 aaPredicted RBP18.49■□□□□ 0.55
CPSF3-203ENST00000475482 STK11IPQ8N1F8 1099 aa18.49■□□□□ 0.55
CPSF3-203ENST00000475482 NEDD1Q8NHV4 660 aa18.49■□□□□ 0.55
CPSF3-203ENST00000475482 ATG4CQ96DT6 458 aa18.49■□□□□ 0.55
CPSF3-203ENST00000475482 TBC1D32Q96NH3 1257 aa18.49■□□□□ 0.55
CPSF3-203ENST00000475482 HMX1Q9NP08 348 aaPredicted RBP18.49■□□□□ 0.55
CPSF3-203ENST00000475482 ANAPC4Q9UJX5 808 aa18.49■□□□□ 0.55
CPSF3-203ENST00000475482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
CPSF3-203ENST00000475482 STRNO43815 780 aa18.48■□□□□ 0.55
CPSF3-203ENST00000475482 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
CPSF3-203ENST00000475482 CCL14Q16627 93 aa18.48■□□□□ 0.55
CPSF3-203ENST00000475482 VPS53Q5VIR6 699 aa18.48■□□□□ 0.55
CPSF3-203ENST00000475482 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
CPSF3-203ENST00000475482 MTMR4Q9NYA4 1195 aa18.48■□□□□ 0.55
CPSF3-203ENST00000475482 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 F5H6K3 240 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 FGRP09769 529 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 PRKAR2AP13861 404 aaKnown RBP18.47■□□□□ 0.55
CPSF3-203ENST00000475482 ZKSCAN1P17029 563 aaPredicted RBP18.47■□□□□ 0.55
CPSF3-203ENST00000475482 ERCC3P19447 782 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 MCCP23508 829 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 PDE4BQ07343 736 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 KLRC3Q07444 240 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 CACNB2Q08289 660 aaPredicted RBP18.47■□□□□ 0.55
CPSF3-203ENST00000475482 MCMDC2Q4G0Z9 681 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 REPS2Q8NFH8 660 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 CEP95Q96GE4 821 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 FBXO28Q9NVF7 368 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 PPP1R9AQ9ULJ8 1098 aa18.47■□□□□ 0.55
CPSF3-203ENST00000475482 VWA5AO00534 786 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 SGSM2O43147 1006 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 FARP2O94887 1054 aaPredicted RBP18.46■□□□□ 0.55
CPSF3-203ENST00000475482 NDUFB10O96000 172 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 SLC3A2P08195 630 aaKnown RBP18.46■□□□□ 0.55
CPSF3-203ENST00000475482 RBM25P49756 843 aaKnown RBP18.46■□□□□ 0.55
CPSF3-203ENST00000475482 MNX1P50219 401 aaPredicted RBP18.46■□□□□ 0.55
CPSF3-203ENST00000475482 TMEM132BQ14DG7 1078 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 FAM83BQ5T0W9 1011 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
CPSF3-203ENST00000475482 ABRAQ8N0Z2 381 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 ANKLE1Q8NAG6 615 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 MROH8Q9H579 483 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 FLRT1Q9NZU1 646 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 OGDHLQ9ULD0 1010 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 TACC3Q9Y6A5 838 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 IVNS1ABPQ9Y6Y0 642 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 ZMYM6O95789 1325 aa18.46■□□□□ 0.55
CPSF3-203ENST00000475482 TTLL1O95922 423 aa18.45■□□□□ 0.54
CPSF3-203ENST00000475482 TFRCP02786 760 aaKnown RBP18.45■□□□□ 0.54
CPSF3-203ENST00000475482 ZNF589Q86UQ0 364 aaPredicted RBP18.45■□□□□ 0.54
CPSF3-203ENST00000475482 GMCL1P1Q8NEA9 526 aa18.45■□□□□ 0.54
CPSF3-203ENST00000475482 NPLOC4Q8TAT6 608 aa18.45■□□□□ 0.54
CPSF3-203ENST00000475482 CLIP2Q9UDT6 1046 aa18.45■□□□□ 0.54
CPSF3-203ENST00000475482 ZNF214Q9UL59 606 aaPredicted RBP18.45■□□□□ 0.54
CPSF3-203ENST00000475482 ALPK3Q96L96 1907 aa18.45■□□□□ 0.54
CPSF3-203ENST00000475482 SLC25A27O95847 323 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 FGAP02671 866 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 TSPY3P0CV98 308 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 TSPY8P0CW00 308 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 NOVP48745 357 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 TFAP4Q01664 338 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 NMIQ13287 307 aaPredicted RBP18.44■□□□□ 0.54
CPSF3-203ENST00000475482 WDR78Q5VTH9 848 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 RIOX2Q8IUF8 465 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 USP26Q9BXU7 913 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 CWC22Q9HCG8 908 aaKnown RBP18.44■□□□□ 0.54
CPSF3-203ENST00000475482 ANO2Q9NQ90 1003 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 FRMPD3Q5JV73 1810 aa18.44■□□□□ 0.54
CPSF3-203ENST00000475482 ORC4O43929 436 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 COBLO75128 1261 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 HSPD1P10809 573 aaKnown RBP18.43■□□□□ 0.54
CPSF3-203ENST00000475482 ADORA2AP29274 412 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 CTDSPL2Q05D32 466 aa18.43■□□□□ 0.54
CPSF3-203ENST00000475482 FAM47AQ5JRC9 791 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms