RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 TTLL1O95922 423 aa20.97■□□□□ 0.95
SEC61A2-213ENST00000475268 ZNF174Q15697 407 aa20.97■□□□□ 0.95
SEC61A2-213ENST00000475268 C11orf57Q6ZUT1 292 aaPredicted RBP20.97■□□□□ 0.95
SEC61A2-213ENST00000475268 RRAGDQ9NQL2 400 aaPredicted RBP20.97■□□□□ 0.95
SEC61A2-213ENST00000475268 ANO10Q9NW15 660 aa20.97■□□□□ 0.95
SEC61A2-213ENST00000475268 ESPNB1AK53 854 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 AP5Z1O43299 807 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 RAD17O75943 681 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 PDHBP11177 359 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 TTC38Q5R3I4 469 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 HOMER1Q86YM7 354 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 VAT1LQ9HCJ6 419 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 BARHL2Q9NY43 387 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 PCDHA4Q9UN74 947 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 FRMPD2Q68DX3 1309 aaPredicted RBP20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 FAM196BA6NMK8 535 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 ZRSR1Q15695 479 aaKnown RBP20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 CCDC148Q8NFR7 591 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 DNAJC18Q9H819 358 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 FAM13BQ9NYF5 915 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 PI4KBQ9UBF8 816 aa20.96■□□□□ 0.95
SEC61A2-213ENST00000475268 STXBP3O00186 592 aa20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 ATP2B2Q01814 1243 aa20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 SH3BP5LQ7L8J4 393 aa20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 PRMT6Q96LA8 375 aaPredicted RBP20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 UBA5Q9GZZ9 404 aa20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 LONRF3Q496Y0 759 aa20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 HS1BP3Q53T59 392 aa20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 RSBN1LQ6PCB5 846 aaPredicted RBP20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 ZNF579Q8NAF0 562 aaKnown RBP20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 RRP36Q96EU6 259 aaKnown RBP20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 TRIM34Q9BYJ4 488 aa20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 CSRNP2Q9H175 543 aa20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 SEC63Q9UGP8 760 aaKnown RBP20.95■□□□□ 0.94
SEC61A2-213ENST00000475268 BMP15O95972 392 aa20.94■□□□□ 0.94
SEC61A2-213ENST00000475268 PTMAP06454 111 aaKnown RBP20.94■□□□□ 0.94
SEC61A2-213ENST00000475268 RASGRP4Q8TDF6 673 aa20.94■□□□□ 0.94
SEC61A2-213ENST00000475268 ATF5Q9Y2D1 282 aaPredicted RBP20.94■□□□□ 0.94
SEC61A2-213ENST00000475268 NPM3O75607 178 aaKnown RBP20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 SMARCA1P28370 1054 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 TRAPPC10P48553 1259 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 CNNM3Q8NE01 707 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 CCDC17Q96LX7 622 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 CCDC39Q9UFE4 941 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 PSMD14O00487 310 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 BIN1O00499 593 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 KRBA2Q6ZNG9 492 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 PIGSQ96S52 555 aa20.93■□□□□ 0.94
SEC61A2-213ENST00000475268 NAPAP54920 295 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 PTGDRQ13258 359 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 IQCB1Q15051 598 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 CERKLQ49MI3 558 aaPredicted RBP20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 ASPRV1Q53RT3 343 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 GPCPD1Q9NPB8 672 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 PIM2Q9P1W9 311 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 MORC2Q9Y6X9 1032 aaPredicted RBP20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 GOLGA6L19H0YKK7 550 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 POLR2DO15514 142 aaKnown RBP20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 SNHG28P0DPA3 235 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 MCM7P33993 719 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 GALNT17Q6IS24 598 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 USP49Q70CQ1 688 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 CEP57L1Q8IYX8 460 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 PCDHA6Q9UN73 950 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 PCDHA8Q9Y5H6 950 aa20.92■□□□□ 0.94
SEC61A2-213ENST00000475268 CCDC194A0A1B0GVG4 234 aa20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 M0R2N6 131 aa20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 VIL1P09327 827 aaKnown RBP20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 DAGLBQ8NCG7 672 aa20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 FERMT2Q96AC1 680 aa20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 NAT10Q9H0A0 1025 aaKnown RBP20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 RIOX1Q9H6W3 641 aa20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 ZBTB12Q9Y330 459 aaPredicted RBP20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 COL4A5P29400 1685 aa20.91■□□□□ 0.94
SEC61A2-213ENST00000475268 TGFB2P61812 414 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 PNOCQ13519 176 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 SHROOM1Q2M3G4 852 aaPredicted RBP20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 DPCR1Q3MIW9 517 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 ZSCAN30Q86W11 494 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 FOXP4Q8IVH2 680 aaPredicted RBP20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 CCDC12Q8WUD4 166 aaPredicted RBP20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 SIPA1L1O43166 1804 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 BECN2A8MW95 431 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 ENTPD3O75355 529 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 POLD1P28340 1107 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 ATP2C1P98194 919 aaPredicted RBP20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 SOGA3Q5TF21 947 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 METTL16Q86W50 562 aaKnown RBP20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 OGFOD1Q8N543 542 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 PDILTQ8N807 584 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 ZMYND12Q9H0C1 365 aa20.9■□□□□ 0.94
SEC61A2-213ENST00000475268 ZNF543Q08ER8 600 aa20.89■□□□□ 0.94
SEC61A2-213ENST00000475268 PPP4R3BQ5MIZ7 849 aa20.89■□□□□ 0.94
SEC61A2-213ENST00000475268 ISM2Q6H9L7 571 aa20.89■□□□□ 0.94
SEC61A2-213ENST00000475268 CCDC125Q86Z20 511 aa20.89■□□□□ 0.94
SEC61A2-213ENST00000475268 NIM1KQ8IY84 436 aa20.89■□□□□ 0.94
SEC61A2-213ENST00000475268 FAM177A1Q8N128 213 aaPredicted RBP20.89■□□□□ 0.94
SEC61A2-213ENST00000475268 PPP1R1BQ9UD71 204 aaPredicted RBP20.89■□□□□ 0.94
SEC61A2-213ENST00000475268 HDAC9Q9UKV0 1011 aa20.89■□□□□ 0.94
SEC61A2-213ENST00000475268 KIF13BQ9NQT8 1826 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms