RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 KCTD2Q14681 263 aa15.22■□□□□ 0.03
SKA3-206ENST00000475251 PRAMEF19Q5SWL8 479 aa15.22■□□□□ 0.03
SKA3-206ENST00000475251 SH3RF1Q7Z6J0 888 aa15.22■□□□□ 0.03
SKA3-206ENST00000475251 ATG4CQ96DT6 458 aa15.22■□□□□ 0.03
SKA3-206ENST00000475251 MMP19Q99542 508 aa15.22■□□□□ 0.03
SKA3-206ENST00000475251 DCP1AQ9NPI6 582 aaPredicted RBP15.22■□□□□ 0.03
SKA3-206ENST00000475251 MYH8P13535 1937 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 KIAA0355O15063 1070 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 AKR1A1P14550 325 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 FPGSQ05932 587 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.21■□□□□ 0.03
SKA3-206ENST00000475251 SDR42E1Q8WUS8 393 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 DDRGK1Q96HY6 314 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 TINF2Q9BSI4 451 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 PRDM6Q9NQX0 595 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
SKA3-206ENST00000475251 ZNF532Q9HCE3 1301 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 A0A1W2PQ45 241 aaPredicted RBP15.2■□□□□ 0.02
SKA3-206ENST00000475251 A0A1W2PQY0 241 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 PQBP1O60828 265 aaKnown RBP15.2■□□□□ 0.02
SKA3-206ENST00000475251 TMEM132BQ14DG7 1078 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 CCDC174Q6PII3 467 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 RIOX2Q8IUF8 465 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 MSL3Q8N5Y2 521 aaKnown RBP15.2■□□□□ 0.02
SKA3-206ENST00000475251 NUP133Q8WUM0 1156 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 TOX2Q96NM4 488 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 TSEN34Q9BSV6 310 aaKnown RBP15.2■□□□□ 0.02
SKA3-206ENST00000475251 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 ATP8A2Q9NTI2 1148 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 TMEM39AQ9NV64 488 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
SKA3-206ENST00000475251 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.19■□□□□ 0.02
SKA3-206ENST00000475251 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.19■□□□□ 0.02
SKA3-206ENST00000475251 DCDC2CA8MYV0 355 aa15.19■□□□□ 0.02
SKA3-206ENST00000475251 KIAA1755Q5JYT7 1200 aa15.19■□□□□ 0.02
SKA3-206ENST00000475251 CEP85Q6P2H3 762 aa15.19■□□□□ 0.02
SKA3-206ENST00000475251 ANKRD33Q7Z3H0 272 aa15.19■□□□□ 0.02
SKA3-206ENST00000475251 CLASRPQ8N2M8 674 aaKnown RBP15.19■□□□□ 0.02
SKA3-206ENST00000475251 LCORLQ8N3X6 602 aa15.19■□□□□ 0.02
SKA3-206ENST00000475251 SLC44A5Q8NCS7 719 aa15.19■□□□□ 0.02
SKA3-206ENST00000475251 STARD7Q9NQZ5 370 aa15.19■□□□□ 0.02
SKA3-206ENST00000475251 ADAMTS5Q9UNA0 930 aa15.19■□□□□ 0.02
SKA3-206ENST00000475251 MROH7Q68CQ1 1323 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 PARP14Q460N5 1801 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 MOXD2PA6NHM9 499 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 GOLIM4O00461 696 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 PGK1P00558 417 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 AKR1B1P15121 316 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 STAT3P40763 770 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 ZNF792Q3KQV3 632 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 TJAP1Q5JTD0 557 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 DNAJC2Q99543 621 aaKnown RBP15.18■□□□□ 0.02
SKA3-206ENST00000475251 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.02
SKA3-206ENST00000475251 KANSL2Q9H9L4 492 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 EYSQ5T1H1 3165 aa15.18■□□□□ 0.02
SKA3-206ENST00000475251 ZNFX1Q9P2E3 1918 aaKnown RBP15.17■□□□□ 0.02
SKA3-206ENST00000475251 PLXNA1Q9UIW2 1896 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 TCRBV5S4A2TA0A5A2 114 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 PGK2P07205 417 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 IFIT2P09913 472 aaKnown RBP15.17■□□□□ 0.02
SKA3-206ENST00000475251 ZNF865P0CJ78 1059 aaPredicted RBP15.17■□□□□ 0.02
SKA3-206ENST00000475251 CYP2D6P10635 497 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 DNAJB2P25686 324 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 ITGB8P26012 769 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 SIAH1Q8IUQ4 282 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 RHPN1Q8TCX5 695 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 DYNLL2Q96FJ2 89 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 IL1RAPL2Q9NP60 686 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 PPP1R9AQ9ULJ8 1098 aa15.17■□□□□ 0.02
SKA3-206ENST00000475251 COL11A1P12107 1806 aaPredicted RBP15.16■□□□□ 0.02
SKA3-206ENST00000475251 VWA5AO00534 786 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 ADAMTS4O75173 837 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 EEF2P13639 858 aaKnown RBP15.16■□□□□ 0.02
SKA3-206ENST00000475251 CDK8P49336 464 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 ACLYP53396 1101 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 EPHB4P54760 987 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 EVX2Q03828 476 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 CLEC10AQ8IUN9 316 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 KIF1BPQ96EK5 621 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 GLT1D1Q96MS3 346 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 ZNF576Q9H609 170 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 ARMT1Q9H993 441 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 FAM184BQ9ULE4 1060 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 SYNGAP1Q96PV0 1343 aa15.16■□□□□ 0.02
SKA3-206ENST00000475251 VCANP13611 3396 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 MBD4O95243 580 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 TIMP1P01033 207 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 FAAP100Q0VG06 881 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 PPIGQ13427 754 aaKnown RBP eCLIP15.15■□□□□ 0.02
SKA3-206ENST00000475251 C12orf60Q5U649 245 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 C16orf86Q6ZW13 317 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 PCSK9Q8NBP7 692 aaKnown RBP15.15■□□□□ 0.02
SKA3-206ENST00000475251 TIFAQ96CG3 184 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 DDX11Q96FC9 970 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 GAS2L1Q99501 681 aaPredicted RBP15.15■□□□□ 0.02
SKA3-206ENST00000475251 TEX13BQ9BXU2 312 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 SPC25Q9HBM1 224 aa15.15■□□□□ 0.02
SKA3-206ENST00000475251 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
SKA3-206ENST00000475251 SMCHD1A6NHR9 2005 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms