RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
DDX39B-217ENST00000474961 MTMR4Q9NYA4 1195 aa11.15□□□□□ -0.62
DDX39B-217ENST00000474961 BRPF3Q9ULD4 1205 aa11.15□□□□□ -0.62
DDX39B-217ENST00000474961 ZBTB21Q9ULJ3 1066 aa11.15□□□□□ -0.62
DDX39B-217ENST00000474961 TPCN1Q9ULQ1 816 aa11.15□□□□□ -0.62
DDX39B-217ENST00000474961 LIMCH1Q9UPQ0 1083 aa11.15□□□□□ -0.62
DDX39B-217ENST00000474961 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 CCDC69A6NI79 296 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 K7ELQ4 463 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-217ENST00000474961 TK2O00142 265 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 ITGBL1O95965 494 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-217ENST00000474961 ASNSP08243 561 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 IREB2P48200 963 aaKnown RBP11.14□□□□□ -0.63
DDX39B-217ENST00000474961 EVCP57679 992 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 BECN1Q14457 450 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 CLEC10AQ8IUN9 316 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.14□□□□□ -0.631e-34■■□□□ 12.6
DDX39B-217ENST00000474961 ZKSCAN4Q969J2 545 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-217ENST00000474961 TMX3Q96JJ7 454 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 ZSCAN31Q96LW9 406 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-217ENST00000474961 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 KANSL2Q9H9L4 492 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 CLIP2Q9UDT6 1046 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 NAP1L2Q9ULW6 460 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-217ENST00000474961 STX8Q9UNK0 236 aa11.14□□□□□ -0.63
DDX39B-217ENST00000474961 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 LARGE1O95461 756 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 TTLL1O95922 423 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
DDX39B-217ENST00000474961 EEF2P13639 858 aaKnown RBP11.13□□□□□ -0.63
DDX39B-217ENST00000474961 PDIA3P30101 505 aaKnown RBP11.13□□□□□ -0.63
DDX39B-217ENST00000474961 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 ICA1Q05084 483 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-217ENST00000474961 ME3Q16798 604 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 APOA5Q6Q788 366 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 MOB2Q70IA6 237 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 CATIPQ7Z7H3 387 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 SIAH1Q8IUQ4 282 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 SCYL3Q8IZE3 742 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 ZNF654Q8IZM8 581 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 ZNF274Q96GC6 653 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-217ENST00000474961 KAT14Q9H8E8 782 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 NYAP2Q9P242 653 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-217ENST00000474961 SLC12A7Q9Y666 1083 aa11.13□□□□□ -0.63
DDX39B-217ENST00000474961 GOLGA8BA8MQT2 603 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 ZBTB43O43298 467 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 STK3Q13188 491 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 NOL9Q5SY16 702 aaKnown RBP11.12□□□□□ -0.63
DDX39B-217ENST00000474961 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-217ENST00000474961 ARMC9Q7Z3E5 817 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 CCDC84Q86UT8 332 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-217ENST00000474961 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 NECAB1Q8N987 351 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 PNMA1Q8ND90 353 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 MKL1Q969V6 931 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 SLC4A5Q9BY07 1137 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 PICK1Q9NRD5 415 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 SH2B1Q9NRF2 756 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-217ENST00000474961 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
DDX39B-217ENST00000474961 MYH6P13533 1939 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 USP17L5A8MUK1 530 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 UBE2Q2LH0YL09 131 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 PFKFB2O60825 505 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 CELF2O95319 508 aaKnown RBP11.11□□□□□ -0.63
DDX39B-217ENST00000474961 RXRAP19793 462 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 CCT2P78371 535 aaKnown RBP11.11□□□□□ -0.63
DDX39B-217ENST00000474961 VGLL4Q14135 290 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 MICU3Q86XE3 530 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
DDX39B-217ENST00000474961 ACER1Q8TDN7 264 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 MYL10Q9BUA6 226 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 SLKQ9H2G2 1235 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-217ENST00000474961 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 GBA2Q9HCG7 927 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-217ENST00000474961 CSADQ9Y600 493 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 SNCAIPQ9Y6H5 919 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 PTPRFP10586 1907 aa11.11□□□□□ -0.63
DDX39B-217ENST00000474961 BAZ2BQ9UIF8 2168 aaKnown RBP11.1□□□□□ -0.63
DDX39B-217ENST00000474961 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 GOLGA8AA7E2F4 631 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 DDAH1O94760 285 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CALM1P0DP23 149 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CALM2P0DP24 149 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CALM3P0DP25 149 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 PTPRAP18433 802 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 ECE1P42892 770 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 SLC4A3P48751 1232 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 METAP2P50579 478 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDX39B-217ENST00000474961 RCAN1P53805 252 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 ST3GAL1Q11201 340 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 SCRN1Q12765 414 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 TROAPQ12815 778 aa11.1□□□□□ -0.63
DDX39B-217ENST00000474961 CUL4AQ13619 759 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms