RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 HMGCS2P54868 508 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 CTDSPL2Q05D32 466 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 MTMR2Q13614 643 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 MOGSQ13724 837 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 ARHGEF6Q15052 776 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 TAF1CQ15572 869 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 AKNAD1Q5T1N1 836 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 GPAT2Q6NUI2 795 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 MFSD6Q6ZSS7 791 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 CCDC83Q8IWF9 413 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 NEDD1Q8NHV4 660 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 PTPN18Q99952 460 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 KRT23Q9C075 422 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 CNNM2Q9H8M5 875 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 GOPCQ9HD26 462 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 TCP11L1Q9NUJ3 509 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 SMC3Q9UQE7 1217 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 IGKV6D-41A0A0C4DH26 115 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 TSPY2A6NKD2 308 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 ZKSCAN1P17029 563 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 HOXA7P31268 230 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 JAG1P78504 1218 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 COL9A3Q14050 684 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 ZSCAN30Q86W11 494 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 LPAR1Q92633 364 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 ESR2Q92731 530 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 MAP4K1Q92918 833 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 ZSWIM6Q9HCJ5 1215 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 CNPY2Q9Y2B0 182 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 TMX2Q9Y320 296 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 RBM8AQ9Y5S9 174 aaKnown RBP4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 CYP46A1Q9Y6A2 500 aa4.86□□□□□ -1.63
GAPVD1-216ENST00000474637 UQCRHLA0A096LP55 91 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L15C9J2P7 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L13C9JLJ4 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L11C9JVI0 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L18D6R9N7 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L22D6RA61 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L17D6RBQ6 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L19D6RCP7 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L20D6RJB6 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 GPR25O00155 361 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TLR2O60603 784 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 FKTNO75072 461 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 OFD1O75665 1012 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TBC1D8O95759 1140 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TTLL1O95922 423 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 UQCRHP07919 91 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 GJB2P29033 226 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 GCLCP48506 637 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 IRX3P78415 501 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TFAP4Q01664 338 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 EVX2Q03828 476 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 USP17L24Q0WX57 530 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TRDNQ13061 729 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 CRHR2Q13324 411 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 KIF22Q14807 665 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 ME3Q16798 604 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 CREB3L3Q68CJ9 461 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 CCDC84Q86UT8 332 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 STK11IPQ8N1F8 1099 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 NECAB1Q8N987 351 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 KCNB2Q92953 911 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 MKL1Q969V6 931 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 ERO1AQ96HE7 468 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 PDLIM2Q96JY6 352 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 VCPKMTQ9H867 229 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 PLSCR2Q9NRY7 297 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TOMM22Q9NS69 142 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 MTMR4Q9NYA4 1195 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 ADGRA2Q96PE1 1338 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 WDR46O15213 610 aaKnown RBP4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 RANBP6O60518 1105 aaKnown RBP4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 PRDM1O75626 825 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 EEF2P13639 858 aaKnown RBP4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 LBX1P52954 281 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 HAND2P61296 217 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 PDE4CQ08493 712 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 SHROOM1Q2M3G4 852 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 FAM47AQ5JRC9 791 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TREML2Q5T2D2 321 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 RNF20Q5VTR2 975 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 GMCL1P1Q8NEA9 526 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 ACER1Q8TDN7 264 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 ZSCAN31Q96LW9 406 aaPredicted RBP4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TCEANC2Q96MN5 208 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TM6SF1Q9BZW5 370 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TSPY26PQ9H489 355 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 EMILIN3Q9NT22 766 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 CLIP2Q9UDT6 1046 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 TPCN1Q9ULQ1 816 aa4.85□□□□□ -1.63
GAPVD1-216ENST00000474637 MYPNQ86TC9 1320 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 MYH4Q9Y623 1939 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 SMIM22K7EJ46 135 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 SLC27A2O14975 620 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 FIBPO43427 364 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 F13A1P00488 732 aa4.84□□□□□ -1.63
GAPVD1-216ENST00000474637 GNRH1P01148 92 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms