RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 WASF1Q92558 559 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 ZIC5Q96T25 663 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 ZBTB21Q9ULJ3 1066 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 PRPF3O43395 683 aaKnown RBP23.62■■□□□ 1.37
CDHR3-210ENST00000474330 DEXIO95424 95 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 PARP1P09874 1014 aaKnown RBP23.62■■□□□ 1.37
CDHR3-210ENST00000474330 PDHBP11177 359 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 MAP2K2P36507 400 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 ATP2B2Q01814 1243 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 STAG2Q8N3U4 1231 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 LZTS2Q9BRK4 669 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 ALG1Q9BT22 464 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 SYNPO2Q9UMS6 1093 aa23.62■■□□□ 1.37
CDHR3-210ENST00000474330 UBE2Q2LH0YL09 131 aa23.61■■□□□ 1.37
CDHR3-210ENST00000474330 DOCK1Q14185 1865 aa23.61■■□□□ 1.37
CDHR3-210ENST00000474330 CNTNAP5Q8WYK1 1306 aa23.61■■□□□ 1.37
CDHR3-210ENST00000474330 C8orf76Q96K31 380 aa23.61■■□□□ 1.37
CDHR3-210ENST00000474330 GBP4Q96PP9 640 aa23.61■■□□□ 1.37
CDHR3-210ENST00000474330 GINM1Q9NU53 330 aa23.61■■□□□ 1.37
CDHR3-210ENST00000474330 FZD1Q9UP38 647 aa23.61■■□□□ 1.37
CDHR3-210ENST00000474330 MTMR7Q9Y216 660 aa23.61■■□□□ 1.37
CDHR3-210ENST00000474330 ASNSP08243 561 aa23.6■■□□□ 1.37
CDHR3-210ENST00000474330 AKAP17AQ02040 695 aaKnown RBP23.6■■□□□ 1.37
CDHR3-210ENST00000474330 NFKBIBQ15653 356 aa23.6■■□□□ 1.37
CDHR3-210ENST00000474330 FBXO18Q8NFZ0 1043 aa23.6■■□□□ 1.37
CDHR3-210ENST00000474330 USP17L5A8MUK1 530 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 SMARCA1P28370 1054 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 ZNF157P51786 506 aaPredicted RBP23.59■■□□□ 1.37
CDHR3-210ENST00000474330 ASPRV1Q53RT3 343 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 USP17L2Q6R6M4 530 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 AIFM3Q96NN9 605 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 ZNF341Q9BYN7 854 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 KLRF2D3W0D1 207 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 FOXN1O15353 648 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 CTNND1O60716 968 aaKnown RBP23.59■■□□□ 1.37
CDHR3-210ENST00000474330 NF2P35240 595 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 RBM27Q9P2N5 1060 aaKnown RBP23.59■■□□□ 1.37
CDHR3-210ENST00000474330 ZNF112Q9UJU3 913 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 ATP6V1DQ9Y5K8 247 aa23.59■■□□□ 1.37
CDHR3-210ENST00000474330 V9GY48 417 aaPredicted RBP23.59■■□□□ 1.37
CDHR3-210ENST00000474330 OTOFQ9HC10 1997 aa23.58■■□□□ 1.37
CDHR3-210ENST00000474330 BAG4O95429 457 aaKnown RBP23.58■■□□□ 1.36
CDHR3-210ENST00000474330 GOLGA8HP0CJ92 632 aa23.58■■□□□ 1.36
CDHR3-210ENST00000474330 MAP2K1Q02750 393 aaPredicted RBP23.58■■□□□ 1.36
CDHR3-210ENST00000474330 PRKG1Q13976 671 aa23.58■■□□□ 1.36
CDHR3-210ENST00000474330 PKN1Q16512 942 aa23.58■■□□□ 1.36
CDHR3-210ENST00000474330 RASGRP2Q7LDG7 609 aa23.58■■□□□ 1.36
CDHR3-210ENST00000474330 GMCL1P1Q8NEA9 526 aa23.58■■□□□ 1.36
CDHR3-210ENST00000474330 CCDC102AQ96A19 550 aa23.58■■□□□ 1.36
CDHR3-210ENST00000474330 ARHGEF10LQ9HCE6 1279 aa23.58■■□□□ 1.36
CDHR3-210ENST00000474330 BAZ2BQ9UIF8 2168 aaKnown RBP23.58■■□□□ 1.36
CDHR3-210ENST00000474330 FOSBP53539 338 aa23.57■■□□□ 1.36
CDHR3-210ENST00000474330 SPZ1Q9BXG8 430 aa23.57■■□□□ 1.36
CDHR3-210ENST00000474330 A0A1W2PRG0 241 aa23.56■■□□□ 1.36
CDHR3-210ENST00000474330 SLC10A3P09131 477 aa23.56■■□□□ 1.36
CDHR3-210ENST00000474330 ZNF543Q08ER8 600 aa23.56■■□□□ 1.36
CDHR3-210ENST00000474330 NOGQ13253 232 aa23.56■■□□□ 1.36
CDHR3-210ENST00000474330 GPATCH4Q5T3I0 446 aaKnown RBP23.56■■□□□ 1.36
CDHR3-210ENST00000474330 LDLRAD1Q5T700 205 aa23.56■■□□□ 1.36
CDHR3-210ENST00000474330 ZSCAN16Q9H4T2 348 aaPredicted RBP23.56■■□□□ 1.36
CDHR3-210ENST00000474330 TMX2Q9Y320 296 aa23.56■■□□□ 1.36
CDHR3-210ENST00000474330 F5H6K3 240 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 CYTH3O43739 400 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 PPP1R12BO60237 982 aaPredicted RBP23.55■■□□□ 1.36
CDHR3-210ENST00000474330 MCM4P33991 863 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 GUCY1B3Q02153 619 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 KLRC3Q07444 240 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 TRIM29Q14134 588 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 TTLL12Q14166 644 aaPredicted RBP23.55■■□□□ 1.36
CDHR3-210ENST00000474330 SLC35G1Q2M3R5 365 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 SLFN13Q68D06 897 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 RASAL3Q86YV0 1011 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 DCAF4Q8WV16 495 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 GJB4Q9NTQ9 266 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 RESTQ13127 1097 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 MAP3K11Q16584 847 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 KRT40Q6A162 431 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 OTUD7BQ6GQQ9 843 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 FERMT3Q86UX7 667 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 WRNIP1Q96S55 665 aa23.55■■□□□ 1.36
CDHR3-210ENST00000474330 TCHHQ07283 1943 aa23.54■■□□□ 1.36
CDHR3-210ENST00000474330 FRMPD2Q68DX3 1309 aaPredicted RBP23.54■■□□□ 1.36
CDHR3-210ENST00000474330 GMCL1Q96IK5 515 aa23.54■■□□□ 1.36
CDHR3-210ENST00000474330 RIOX1Q9H6W3 641 aa23.54■■□□□ 1.36
CDHR3-210ENST00000474330 hCG_1642624A0A1W2PR95 340 aa23.53■■□□□ 1.36
CDHR3-210ENST00000474330 USP2O75604 605 aaPredicted RBP23.53■■□□□ 1.36
CDHR3-210ENST00000474330 INPP5BP32019 993 aa23.53■■□□□ 1.36
CDHR3-210ENST00000474330 PFKFB3Q16875 520 aaPredicted RBP23.53■■□□□ 1.36
CDHR3-210ENST00000474330 COL13A1Q5TAT6 717 aaPredicted RBP23.53■■□□□ 1.36
CDHR3-210ENST00000474330 ARMC9Q7Z3E5 817 aa23.53■■□□□ 1.36
CDHR3-210ENST00000474330 ACER1Q8TDN7 264 aa23.53■■□□□ 1.36
CDHR3-210ENST00000474330 SH2D4AQ9H788 454 aa23.53■■□□□ 1.36
CDHR3-210ENST00000474330 NDUFB10O96000 172 aa23.52■■□□□ 1.36
CDHR3-210ENST00000474330 SCG2P13521 617 aa23.52■■□□□ 1.36
CDHR3-210ENST00000474330 XBP1P17861 261 aa23.52■■□□□ 1.36
CDHR3-210ENST00000474330 SLC1A4P43007 532 aa23.52■■□□□ 1.36
CDHR3-210ENST00000474330 KIF23Q02241 960 aaPredicted RBP23.52■■□□□ 1.36
CDHR3-210ENST00000474330 SCYL3Q8IZE3 742 aa23.52■■□□□ 1.36
CDHR3-210ENST00000474330 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.52■■□□□ 1.36
CDHR3-210ENST00000474330 CCDC96Q2M329 555 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms