RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
SAMM50-203ENST00000474323 CAPN7Q9Y6W3 813 aa16.33■□□□□ 0.2
SAMM50-203ENST00000474323 METAP2P50579 478 aaKnown RBP eCLIP16.33■□□□□ 0.2
SAMM50-203ENST00000474323 HAND2P61296 217 aa16.33■□□□□ 0.2
SAMM50-203ENST00000474323 SEPT12Q8IYM1 358 aa16.33■□□□□ 0.2
SAMM50-203ENST00000474323 OSBP2Q969R2 916 aa16.33■□□□□ 0.2
SAMM50-203ENST00000474323 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.2
SAMM50-203ENST00000474323 GNL3LQ9NVN8 582 aaKnown RBP16.33■□□□□ 0.2
SAMM50-203ENST00000474323 FAM184BQ9ULE4 1060 aa16.33■□□□□ 0.2
SAMM50-203ENST00000474323 COL5A3P25940 1745 aaPredicted RBP16.32■□□□□ 0.2
SAMM50-203ENST00000474323 SYNRGQ9UMZ2 1314 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 ATRNO75882 1429 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 ACTN4O43707 911 aaKnown RBP16.32■□□□□ 0.2
SAMM50-203ENST00000474323 FGAP02671 866 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 CUL4BQ13620 913 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 LRRC24Q50LG9 513 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 JPH2Q9BR39 696 aaPredicted RBP16.32■□□□□ 0.2
SAMM50-203ENST00000474323 FBXO2Q9UK22 296 aaPredicted RBP16.32■□□□□ 0.2
SAMM50-203ENST00000474323 GUCA1BQ9UMX6 200 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 CICQ96RK0 1608 aaPredicted RBP16.32■□□□□ 0.2
SAMM50-203ENST00000474323 RREB1Q92766 1687 aa16.32■□□□□ 0.2
SAMM50-203ENST00000474323 DDX60Q8IY21 1712 aaKnown RBP16.32■□□□□ 0.2
SAMM50-203ENST00000474323 OPA1O60313 960 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 KIAA0754O94854 1291 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 SKOR1P84550 965 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 ZNF34Q8IZ26 560 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 OTUD6BQ8N6M0 293 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
SAMM50-203ENST00000474323 QTRT2Q9H974 415 aaKnown RBP16.31■□□□□ 0.2
SAMM50-203ENST00000474323 EPN1Q9Y6I3 576 aaPredicted RBP16.31■□□□□ 0.2
SAMM50-203ENST00000474323 LRRC10BA6NIK2 292 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 H0YHG0 523 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 CHUKO15111 745 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 CAMTA2O94983 1202 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 GRAMD1CQ8IYS0 662 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 GIMAP7Q8NHV1 300 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 AENQ8WTP8 325 aaKnown RBP16.31■□□□□ 0.2
SAMM50-203ENST00000474323 GDAP1L1Q96MZ0 367 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 EHD4Q9H223 541 aa16.31■□□□□ 0.2
SAMM50-203ENST00000474323 ANGEL1Q9UNK9 670 aaKnown RBP16.31■□□□□ 0.2
SAMM50-203ENST00000474323 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
SAMM50-203ENST00000474323 FOXP2O15409 715 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 MEFVO15553 781 aaPredicted RBP16.3■□□□□ 0.2
SAMM50-203ENST00000474323 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
SAMM50-203ENST00000474323 EPB41P11171 864 aaKnown RBP16.3■□□□□ 0.2
SAMM50-203ENST00000474323 NEDD9Q14511 834 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 CCDC70Q6NSX1 233 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 YTHDF3Q7Z739 585 aaKnown RBP16.3■□□□□ 0.2
SAMM50-203ENST00000474323 NOSTRINQ8IVI9 506 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 RUBCNQ92622 972 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 NUP88Q99567 741 aaPredicted RBP16.3■□□□□ 0.2
SAMM50-203ENST00000474323 PLA2G12BQ9BX93 195 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 MYH8P13535 1937 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 EYA2O00167 538 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 NDUFA10O95299 355 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 MYBL2P10244 700 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 TDO2P48775 406 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 IQCEQ6IPM2 695 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 EHBP1Q8NDI1 1231 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 HDAC6Q9UBN7 1215 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
SAMM50-203ENST00000474323 NDUFAB1O14561 156 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ENC1O14682 589 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ZNF213O14771 459 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ATP1A1P05023 1023 aaKnown RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 GRIN1Q05586 938 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 KLHL10Q6JEL2 608 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ZNF662Q6ZS27 426 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 MICALCLQ6ZW33 695 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ANKRD18AQ8IVF6 992 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 MYH3P11055 1940 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ZEB2O60315 1214 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ONECUT3O60422 494 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ZMYND10O75800 440 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 CSF1RP07333 972 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 RDXP35241 583 aaKnown RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 KRT9P35527 623 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 STX17P56962 302 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 SUSD4Q5VX71 490 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 PHKBQ93100 1093 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 SEC31BQ9NQW1 1179 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 LIMA1Q9UHB6 759 aaKnown RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 REXO2Q9Y3B8 237 aaKnown RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 SAMM50Q9Y512 469 aa16.29■□□□□ 0.2
SAMM50-203ENST00000474323 SRPRBQ9Y5M8 271 aaKnown RBP16.29■□□□□ 0.2
SAMM50-203ENST00000474323 N4BP3O15049 544 aa16.28■□□□□ 0.2
SAMM50-203ENST00000474323 TOB1P50616 345 aaPredicted RBP16.28■□□□□ 0.2
SAMM50-203ENST00000474323 TIMM10P62072 90 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms