RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CCDC144CPQ8IYA2 1237 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 TRMT2BQ96GJ1 504 aaKnown RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 ZFRQ96KR1 1074 aaKnown RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 UROC1Q96N76 676 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 PDRG1Q9NUG6 133 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 CPSF2Q9P2I0 782 aaKnown RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 DCTN4Q9UJW0 460 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 TRPM1Q7Z4N2 1603 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 TK2O00142 265 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 SLC27A2O14975 620 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 AOC2O75106 756 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 MTRF1O75570 445 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 RHOBTB3O94955 611 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 MMEP08473 750 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 CCNCP24863 283 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 SMARCA1P28370 1054 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 DDX10Q13206 875 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 SLFNL1Q499Z3 407 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 CDCA2Q69YH5 1023 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 UNC5DQ6UXZ4 953 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 TRIML1Q8N9V2 468 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 TTC8Q8TAM2 541 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 SRPK1Q96SB4 655 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 AP1M1Q9BXS5 423 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 PRO3102Q9H379 93 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 PRKRIP1Q9H875 184 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 MRS2Q9HD23 443 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 CLIP2Q9UDT6 1046 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 CFAP45Q9UL16 551 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 SPG7Q9UQ90 795 aa6.99□□□□□ -1.29
SMARCE1-208ENST00000474246 SLC5A1P13866 664 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 GLULP15104 373 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 PRPHP41219 470 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 GCGRP47871 477 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 ROR1Q01973 937 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 VAC14Q08AM6 782 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 MYBPC3Q14896 1274 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 KRT72Q14CN4 511 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 DIXDC1Q155Q3 683 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 ZSCAN26Q16670 478 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 KANK4Q5T7N3 995 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 IRGCQ6NXR0 463 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 FBXO46Q6PJ61 603 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 SYNE3Q6ZMZ3 975 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 MAATS1Q7Z4T9 603 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 KIAA0907Q7Z7F0 614 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 JAMLQ86YT9 394 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 ENAHQ8N8S7 591 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 MARCH10Q8NA82 808 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 FAM81BQ96LP2 452 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 FAM161BQ96MY7 647 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 SCLT1Q96NL6 688 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.98□□□□□ -1.291e-14■□□□□ 8.6
SMARCE1-208ENST00000474246 OSBPL5Q9H0X9 879 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 ZNHIT6Q9NWK9 470 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 PPP1R9AQ9ULJ8 1098 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 AKR1B10O60218 316 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 KRT38O76015 456 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 HOXA10P31260 410 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 ISM2Q6H9L7 571 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 CCDC129Q6ZRS4 1044 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 AFAP1L1Q8TED9 768 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 IPCEF1Q8WWN9 437 aaPredicted RBP6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 MAML1Q92585 1016 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 APPBP2Q92624 585 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 HLA-CQ95604 372 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 DCAF5Q96JK2 942 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 EPS15L1Q9UBC2 864 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 ATP8A1Q9Y2Q0 1164 aa6.98□□□□□ -1.29
SMARCE1-208ENST00000474246 CDC42BPGQ6DT37 1551 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 PIP5K1CO60331 668 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 SCNN1AP37088 669 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 HALP42357 657 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 SLC7A5Q01650 507 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 GUCA2AQ02747 115 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 EIF4A2Q14240 407 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 ARMC4Q5T2S8 1044 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 RSBN1LQ6PCB5 846 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 ERMP1Q7Z2K6 904 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 FAM184AQ8NB25 1140 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 JPH3Q8WXH2 748 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 HERPUD2Q9BSE4 406 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 CENPOQ9BU64 300 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 MAK16Q9BXY0 300 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 NDUFB9Q9Y6M9 179 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 H3BRB1 525 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 HRO43593 1189 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 TNFAIP3P21580 790 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 ALDH1B1P30837 517 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 MRPL28Q13084 256 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 PRPF4BQ13523 1007 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 TAF7Q15545 349 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 CIAPIN1Q6FI81 312 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 SWSAP1Q6NVH7 229 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 CYP26C1Q6V0L0 522 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 TBC1D9Q6ZT07 1266 aa6.97□□□□□ -1.29
SMARCE1-208ENST00000474246 CATSPER4Q7RTX7 472 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms