RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 POLKQ9UBT6 870 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 RIPOR2Q9Y4F9 1068 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 METP08581 1390 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 LRPPRCP42704 1394 aaKnown RBP8.47□□□□□ -1.05
GPNMB-209ENST00000474157 EIF3AQ14152 1382 aaKnown RBP8.47□□□□□ -1.05
GPNMB-209ENST00000474157 PARD3Q8TEW0 1356 aa8.47□□□□□ -1.05
GPNMB-209ENST00000474157 SPHKAPQ2M3C7 1700 aa8.46□□□□□ -1.05
GPNMB-209ENST00000474157 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 METTL12A8MUP2 240 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 KIF2AO00139 706 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-209ENST00000474157 SMC2O95347 1197 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 HDLBPQ00341 1268 aaKnown RBP8.46□□□□□ -1.06
GPNMB-209ENST00000474157 RBBP5Q15291 538 aaKnown RBP8.46□□□□□ -1.06
GPNMB-209ENST00000474157 AMOTQ4VCS5 1084 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 PERM1Q5SV97 790 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 LEKR1Q6ZMV7 388 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 TMEM102Q8N9M5 508 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-209ENST00000474157 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-209ENST00000474157 C3orf58Q8NDZ4 430 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 SNX21Q969T3 373 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 PLD4Q96BZ4 506 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 TBC1D32Q96NH3 1257 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 AGAP3Q96P47 875 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 MDFIQ99750 246 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 IQCGQ9H095 443 aaKnown RBP8.46□□□□□ -1.06
GPNMB-209ENST00000474157 ATG3Q9NT62 314 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 CWC25Q9NXE8 425 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-209ENST00000474157 PLEKHG2Q9H7P9 1386 aa8.46□□□□□ -1.06
GPNMB-209ENST00000474157 ELOA3CA0A087WX78 387 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 ELOA3DA6NLF2 546 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 SMTNL1A8MU46 457 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 KINO60870 393 aaKnown RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 CDKL5O76039 1030 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 TRIM37O94972 964 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 RDXP35241 583 aaKnown RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 DDIT3P35638 169 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 ZNF76P36508 570 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 GRIA4P48058 902 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 FANCCQ00597 558 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 SRSF11Q05519 484 aaKnown RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 ELOA3BQ3SY89 546 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 HSP90AB2PQ58FF8 381 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 C9orf131Q5VYM1 1079 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 CEP135Q66GS9 1140 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 SLCO4C1Q6ZQN7 724 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 SMC5Q8IY18 1101 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 ELOA3Q8NG57 546 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 NXPE3Q969Y0 559 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 MMTAG2Q9BU76 263 aaKnown RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 BHLHE41Q9C0J9 482 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 METTL5Q9NRN9 209 aaKnown RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 CPSF2Q9P2I0 782 aaKnown RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 SUN2Q9UH99 717 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 GDF2Q9UK05 429 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 TTF2Q9UNY4 1162 aaKnown RBP8.45□□□□□ -1.06
GPNMB-209ENST00000474157 FRMD4BQ9Y2L6 1034 aa8.45□□□□□ -1.06
GPNMB-209ENST00000474157 COL22A1Q8NFW1 1626 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-209ENST00000474157 RPS6KA5O75582 802 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 SMNDC1O75940 238 aaKnown RBP eCLIP8.44□□□□□ -1.06
GPNMB-209ENST00000474157 IMPDH2P12268 514 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 PSMC1P62191 440 aaKnown RBP8.44□□□□□ -1.06
GPNMB-209ENST00000474157 PDIA5Q14554 519 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 CRYMQ14894 314 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 TAF1CQ15572 869 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-209ENST00000474157 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 DNAJC21Q5F1R6 531 aaKnown RBP8.44□□□□□ -1.06
GPNMB-209ENST00000474157 ZNF280DQ6N043 979 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 ELMSAN1Q6PJG2 1045 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 DTHD1Q6ZMT9 781 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 FAM196AQ6ZSG2 479 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 C10orf67Q8IYJ2 551 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 RPUSD2Q8IZ73 545 aaKnown RBP8.44□□□□□ -1.06
GPNMB-209ENST00000474157 MICALL1Q8N3F8 863 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 RNF34Q969K3 372 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 RMDN2Q96LZ7 410 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 LPIN3Q9BQK8 851 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 MTA3Q9BTC8 594 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 SMG9Q9H0W8 520 aaKnown RBP8.44□□□□□ -1.06
GPNMB-209ENST00000474157 SPATS2LQ9NUQ6 558 aaKnown RBP8.44□□□□□ -1.06
GPNMB-209ENST00000474157 AKAP2Q9Y2D5 859 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 USP31Q70CQ4 1352 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 ADGRL2O95490 1459 aa8.44□□□□□ -1.06
GPNMB-209ENST00000474157 LAMC1P11047 1609 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 XRCC5P13010 732 aaKnown RBP8.43□□□□□ -1.06
GPNMB-209ENST00000474157 RAB3GAP1Q15042 981 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 SF3A1Q15459 793 aaKnown RBP8.43□□□□□ -1.06
GPNMB-209ENST00000474157 GJC2Q5T442 439 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-209ENST00000474157 WDR78Q5VTH9 848 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 PSAPL1Q6NUJ1 521 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 CCDC186Q7Z3E2 898 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 ERC1Q8IUD2 1116 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 RBM12BQ8IXT5 1001 aaKnown RBP8.43□□□□□ -1.06
GPNMB-209ENST00000474157 TEX11Q8IYF3 940 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 GIMAP7Q8NHV1 300 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 CCDC26Q8TAB7 109 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 ACDQ96AP0 544 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 MIEF2Q96C03 454 aa8.43□□□□□ -1.06
GPNMB-209ENST00000474157 POP1Q99575 1024 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms