RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 GPATCH3Q96I76 525 aa29.72■■■□□ 2.35
PKD1-211ENST00000474088 FBXO28Q9NVF7 368 aa29.72■■■□□ 2.35
PKD1-211ENST00000474088 SZT2Q5T011 3432 aa29.71■■■□□ 2.35
PKD1-211ENST00000474088 LRIT3Q3SXY7 679 aa29.71■■■□□ 2.35
PKD1-211ENST00000474088 ARRDC4Q8NCT1 418 aa29.71■■■□□ 2.35
PKD1-211ENST00000474088 APPBP2Q92624 585 aa29.71■■■□□ 2.35
PKD1-211ENST00000474088 RNF113AO15541 343 aaKnown RBP29.7■■■□□ 2.35
PKD1-211ENST00000474088 SEPT4O43236 478 aa29.7■■■□□ 2.35
PKD1-211ENST00000474088 TSHZ3Q63HK5 1081 aa29.7■■■□□ 2.35
PKD1-211ENST00000474088 MAML3Q96JK9 1138 aa29.7■■■□□ 2.35
PKD1-211ENST00000474088 PARP14Q460N5 1801 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 MINDY4BA8MYZ0 360 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 RAD21O60216 631 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 RASA1P20936 1047 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 ATN1P54259 1190 aaPredicted RBP29.69■■■□□ 2.34
PKD1-211ENST00000474088 PRAMEF19Q5SWL8 479 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 GJC2Q5T442 439 aaPredicted RBP29.69■■■□□ 2.34
PKD1-211ENST00000474088 GPR153Q6NV75 609 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 RIOX2Q8IUF8 465 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 STK11IPQ8N1F8 1099 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 MKNK2Q9HBH9 465 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 PPP1R9AQ9ULJ8 1098 aa29.69■■■□□ 2.34
PKD1-211ENST00000474088 VWA5AO00534 786 aa29.68■■■□□ 2.34
PKD1-211ENST00000474088 ZFYP08048 801 aaPredicted RBP29.68■■■□□ 2.34
PKD1-211ENST00000474088 FAM83BQ5T0W9 1011 aa29.68■■■□□ 2.34
PKD1-211ENST00000474088 ANO1Q5XXA6 986 aa29.68■■■□□ 2.34
PKD1-211ENST00000474088 STAT3P40763 770 aa29.67■■■□□ 2.34
PKD1-211ENST00000474088 MDM2Q00987 491 aaPredicted RBP29.67■■■□□ 2.34
PKD1-211ENST00000474088 MMP19Q99542 508 aa29.67■■■□□ 2.34
PKD1-211ENST00000474088 NYAP2Q9P242 653 aa29.67■■■□□ 2.34
PKD1-211ENST00000474088 REPS2Q8NFH8 660 aa29.66■■■□□ 2.34
PKD1-211ENST00000474088 ZNF214Q9UL59 606 aaPredicted RBP29.66■■■□□ 2.34
PKD1-211ENST00000474088 ROBO3Q96MS0 1386 aa29.65■■■□□ 2.34
PKD1-211ENST00000474088 GPAA1O43292 621 aa29.65■■■□□ 2.34
PKD1-211ENST00000474088 GNAT2P19087 354 aa29.65■■■□□ 2.34
PKD1-211ENST00000474088 KBTBD13C9JR72 458 aa29.64■■■□□ 2.34
PKD1-211ENST00000474088 F5H6K3 240 aa29.64■■■□□ 2.34
PKD1-211ENST00000474088 PGK2P07205 417 aa29.64■■■□□ 2.34
PKD1-211ENST00000474088 RTP1P59025 263 aa29.64■■■□□ 2.34
PKD1-211ENST00000474088 KLRC3Q07444 240 aa29.64■■■□□ 2.34
PKD1-211ENST00000474088 KCTD2Q14681 263 aa29.64■■■□□ 2.34
PKD1-211ENST00000474088 EPB41L4AQ9HCS5 686 aaPredicted RBP29.64■■■□□ 2.34
PKD1-211ENST00000474088 DIS3Q9Y2L1 958 aaKnown RBP29.64■■■□□ 2.34
PKD1-211ENST00000474088 COL11A1P12107 1806 aaPredicted RBP29.64■■■□□ 2.33
PKD1-211ENST00000474088 GREB1LQ9C091 1923 aaPredicted RBP29.63■■■□□ 2.33
PKD1-211ENST00000474088 M0R2C6 588 aa29.63■■■□□ 2.33
PKD1-211ENST00000474088 COPB2P35606 906 aa29.63■■■□□ 2.33
PKD1-211ENST00000474088 SLC39A5Q6ZMH5 540 aa29.63■■■□□ 2.33
PKD1-211ENST00000474088 NUP88Q99567 741 aaPredicted RBP29.63■■■□□ 2.33
PKD1-211ENST00000474088 LBHD1Q9BQE6 289 aaPredicted RBP29.63■■■□□ 2.33
PKD1-211ENST00000474088 NRBP1Q9UHY1 535 aa29.63■■■□□ 2.33
PKD1-211ENST00000474088 PATL2C9JE40 543 aaKnown RBP29.62■■■□□ 2.33
PKD1-211ENST00000474088 APPP05067 770 aa29.62■■■□□ 2.33
PKD1-211ENST00000474088 TDO2P48775 406 aa29.62■■■□□ 2.33
PKD1-211ENST00000474088 LRRFIP1Q32MZ4 808 aaKnown RBP29.62■■■□□ 2.33
PKD1-211ENST00000474088 ZNF792Q3KQV3 632 aa29.62■■■□□ 2.33
PKD1-211ENST00000474088 ZNF444Q8N0Y2 327 aaPredicted RBP29.62■■■□□ 2.33
PKD1-211ENST00000474088 SLF1Q9BQI6 1058 aa29.62■■■□□ 2.33
PKD1-211ENST00000474088 TINF2Q9BSI4 451 aa29.62■■■□□ 2.33
PKD1-211ENST00000474088 CLIP2Q9UDT6 1046 aa29.62■■■□□ 2.33
PKD1-211ENST00000474088 TTC41PQ6P2S7 1318 aa29.62■■■□□ 2.33
PKD1-211ENST00000474088 ZNFX1Q9P2E3 1918 aaKnown RBP29.61■■■□□ 2.33
PKD1-211ENST00000474088 IGKV6D-41A0A0C4DH26 115 aa29.61■■■□□ 2.33
PKD1-211ENST00000474088 MYCNP04198 464 aaPredicted RBP29.61■■■□□ 2.33
PKD1-211ENST00000474088 LRRC41Q15345 812 aa29.61■■■□□ 2.33
PKD1-211ENST00000474088 ZNF287Q9HBT7 754 aa29.61■■■□□ 2.33
PKD1-211ENST00000474088 PRKAG2Q9UGJ0 569 aa29.61■■■□□ 2.33
PKD1-211ENST00000474088 PCDHB15Q9Y5E8 787 aa29.61■■■□□ 2.33
PKD1-211ENST00000474088 NDUFB10O96000 172 aa29.6■■■□□ 2.33
PKD1-211ENST00000474088 FAM47AQ5JRC9 791 aa29.6■■■□□ 2.33
PKD1-211ENST00000474088 IFNL3Q8IZI9 196 aa29.6■■■□□ 2.33
PKD1-211ENST00000474088 DEFB123Q8N688 67 aa29.6■■■□□ 2.33
PKD1-211ENST00000474088 PRPF38AQ8NAV1 312 aaKnown RBP29.6■■■□□ 2.33
PKD1-211ENST00000474088 ATP11BQ9Y2G3 1177 aa29.6■■■□□ 2.33
PKD1-211ENST00000474088 ERC2O15083 957 aa29.59■■■□□ 2.33
PKD1-211ENST00000474088 PRDM1O75626 825 aa29.59■■■□□ 2.33
PKD1-211ENST00000474088 MKL1Q969V6 931 aa29.59■■■□□ 2.33
PKD1-211ENST00000474088 TEX13BQ9BXU2 312 aa29.59■■■□□ 2.33
PKD1-211ENST00000474088 ADCYAP1R1P41586 468 aa29.58■■■□□ 2.33
PKD1-211ENST00000474088 Q7L0L9 218 aa29.58■■■□□ 2.33
PKD1-211ENST00000474088 PI4K2BQ8TCG2 481 aa29.58■■■□□ 2.33
PKD1-211ENST00000474088 SEC62Q99442 399 aaKnown RBP29.58■■■□□ 2.33
PKD1-211ENST00000474088 RARBP10826 455 aa29.57■■■□□ 2.32
PKD1-211ENST00000474088 TAL1P17542 331 aaPredicted RBP29.57■■■□□ 2.32
PKD1-211ENST00000474088 SNX17Q15036 470 aa29.57■■■□□ 2.32
PKD1-211ENST00000474088 SNRNP48Q6IEG0 339 aaKnown RBP29.57■■■□□ 2.32
PKD1-211ENST00000474088 FERMT2Q96AC1 680 aa29.57■■■□□ 2.32
PKD1-211ENST00000474088 CEP95Q96GE4 821 aa29.57■■■□□ 2.32
PKD1-211ENST00000474088 MTMR4Q9NYA4 1195 aa29.57■■■□□ 2.32
PKD1-211ENST00000474088 RIPK3Q9Y572 518 aa29.57■■■□□ 2.32
PKD1-211ENST00000474088 ZNF865P0CJ78 1059 aaPredicted RBP29.56■■■□□ 2.32
PKD1-211ENST00000474088 OTUD7AQ8TE49 926 aaPredicted RBP29.56■■■□□ 2.32
PKD1-211ENST00000474088 NACAP1Q9BZK3 213 aa29.56■■■□□ 2.32
PKD1-211ENST00000474088 XPNPEP3Q9NQH7 507 aa29.56■■■□□ 2.32
PKD1-211ENST00000474088 SYNPO2Q9UMS6 1093 aa29.56■■■□□ 2.32
PKD1-211ENST00000474088 ATP2A1O14983 1001 aa29.55■■■□□ 2.32
PKD1-211ENST00000474088 ZBED4O75132 1171 aa29.55■■■□□ 2.32
PKD1-211ENST00000474088 TRIM60Q495X7 471 aa29.55■■■□□ 2.32
PKD1-211ENST00000474088 C1orf53Q5VUE5 145 aa29.55■■■□□ 2.32
PKD1-211ENST00000474088 SLC17A8Q8NDX2 589 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms