RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 IVNS1ABPQ9Y6Y0 642 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 NMT2O60551 498 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 CNMDO75829 334 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 SKAP1Q86WV1 359 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 ESR2Q92731 530 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 ZNF333Q96JL9 665 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 TACC3Q9Y6A5 838 aa16.79■□□□□ 0.28
VAMP4-203ENST00000474047 IKQ13123 557 aaPredicted RBP16.78■□□□□ 0.28
VAMP4-203ENST00000474047 IRF5Q13568 498 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 POTEEQ6S8J3 1075 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 GPR142Q7Z601 462 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 TBC1D10CQ8IV04 446 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 GMCL1P1Q8NEA9 526 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 SOCS4Q8WXH5 440 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 SLF1Q9BQI6 1058 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 IL17RBQ9NRM6 502 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 FBXO28Q9NVF7 368 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 DOCK3Q8IZD9 2030 aa16.78■□□□□ 0.28
VAMP4-203ENST00000474047 ELNP15502 786 aa16.77■□□□□ 0.28
VAMP4-203ENST00000474047 SPATC1LQ9H0A9 340 aa16.77■□□□□ 0.28
VAMP4-203ENST00000474047 IL25Q9H293 177 aa16.77■□□□□ 0.28
VAMP4-203ENST00000474047 PPP1R9AQ9ULJ8 1098 aa16.77■□□□□ 0.28
VAMP4-203ENST00000474047 SGSM2O43147 1006 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 BMP3P12645 472 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 CYP2B6P20813 491 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 SLC1A4P43007 532 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 NCAPG2Q86XI2 1143 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 PRPF38AQ8NAV1 312 aaKnown RBP16.76■□□□□ 0.27
VAMP4-203ENST00000474047 PXYLP1Q8TE99 480 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 NBPF3Q9H094 633 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 FEM1BQ9UK73 627 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 GJD2Q9UKL4 321 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 MCCP23508 829 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 RGS2P41220 211 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 CASC1Q6TDU7 716 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 IQCA1Q86XH1 822 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 KIFC2Q96AC6 838 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 MOV10L1Q9BXT6 1211 aaKnown RBP16.76■□□□□ 0.27
VAMP4-203ENST00000474047 KRT23Q9C075 422 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 CNNM2Q9H8M5 875 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 TCP11L1Q9NUJ3 509 aa16.76■□□□□ 0.27
VAMP4-203ENST00000474047 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
VAMP4-203ENST00000474047 NEDD4P46934 1319 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 TMEM232C9JQI7 657 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 VWA5AO00534 786 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 ZBED4O75132 1171 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
VAMP4-203ENST00000474047 SLC4A3P48751 1232 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 NT5C2P49902 561 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 MLLT1Q03111 559 aaPredicted RBP16.75■□□□□ 0.27
VAMP4-203ENST00000474047 PTH1RQ03431 593 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 CCDC178Q5BJE1 867 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
VAMP4-203ENST00000474047 SLC15A5A6NIM6 579 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 B4E1Z4 1266 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 KDM4AO75164 1064 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 ERCC3P19447 782 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 PTPREP23469 700 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 TRDNQ13061 729 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 TMEM132BQ14DG7 1078 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 CCDC96Q2M329 555 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 SHCBP1Q8NEM2 672 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 GMCL1Q96IK5 515 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 TTC14Q96N46 770 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 ZKSCAN3Q9BRR0 538 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 RNF208Q9H0X6 261 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 MROH8Q9H579 483 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 PPP4R2Q9NY27 417 aa16.74■□□□□ 0.27
VAMP4-203ENST00000474047 STRNO43815 780 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 SLC25A27O95847 323 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 INHAP05111 366 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 STAT3P40763 770 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 RGS19P49795 217 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 STAT2P52630 851 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 DPP9Q86TI2 863 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 TRMT44Q8IYL2 757 aaKnown RBP16.73■□□□□ 0.27
VAMP4-203ENST00000474047 TMEM47Q9BQJ4 181 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 ADAMTS5Q9UNA0 930 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 RLFQ13129 1914 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 HMGCRP04035 888 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 XRCC5P13010 732 aaKnown RBP16.73■□□□□ 0.27
VAMP4-203ENST00000474047 CCL5P13501 91 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 MAP2K5Q13163 448 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 MTFR1Q15390 333 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 MORN1Q5T089 497 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 RCSD1Q6JBY9 416 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 FAM160B2Q86V87 743 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 CPXCR1Q8N123 301 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 UBAC1Q9BSL1 405 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 LAMA4Q16363 1823 aa16.73■□□□□ 0.27
VAMP4-203ENST00000474047 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
VAMP4-203ENST00000474047 COPB2P35606 906 aa16.72■□□□□ 0.27
VAMP4-203ENST00000474047 KCTD1Q719H9 257 aa16.72■□□□□ 0.27
VAMP4-203ENST00000474047 DCAF4Q8WV16 495 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms