RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ARHGEF6Q15052 776 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 FAM110CQ1W6H9 321 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 CCDC96Q2M329 555 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 CD99L2Q8TCZ2 262 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 GMCL1Q96IK5 515 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 SPDYE16A6NNV3 312 aaPredicted RBP14.56□□□□□ -0.08
DDX56-209ENST00000473924 PRC1O43663 620 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 DSG3P32926 999 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 LACTBP83111 547 aaPredicted RBP14.56□□□□□ -0.08
DDX56-209ENST00000473924 WTAPQ15007 396 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 TSGA10IPQ3SY00 556 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 CCAR1Q8IX12 1150 aaKnown RBP14.56□□□□□ -0.08
DDX56-209ENST00000473924 MB21D2Q8IYB1 491 aaPredicted RBP14.56□□□□□ -0.08
DDX56-209ENST00000473924 PNMA1Q8ND90 353 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 GPRC5AQ8NFJ5 357 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 DCAF4Q8WV16 495 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 ANKS1AQ92625 1134 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 SLF1Q9BQI6 1058 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 USP26Q9BXU7 913 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 FBXO28Q9NVF7 368 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 FEM1BQ9UK73 627 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 MYPNQ86TC9 1320 aa14.56□□□□□ -0.08
DDX56-209ENST00000473924 TMEM232C9JQI7 657 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 STAT2P52630 851 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 ANTXR2P58335 489 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 ADCK5Q3MIX3 580 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 LBX2Q6XYB7 198 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 KCTD1Q719H9 257 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 PRPF38AQ8NAV1 312 aaKnown RBP14.55□□□□□ -0.08
DDX56-209ENST00000473924 CHURC1Q8WUH1 139 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 ATG4CQ96DT6 458 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 RBPJLQ9UBG7 517 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 MORF4L1Q9UBU8 362 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 PPP1R9AQ9ULJ8 1098 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 RABGAP1Q9Y3P9 1069 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 CTDP1Q9Y5B0 961 aaPredicted RBP14.55□□□□□ -0.08
DDX56-209ENST00000473924 SNX14Q9Y5W7 946 aa14.55□□□□□ -0.08
DDX56-209ENST00000473924 PEX10O60683 326 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
DDX56-209ENST00000473924 HMGB1P09429 215 aaKnown RBP14.54□□□□□ -0.08
DDX56-209ENST00000473924 PDHBP11177 359 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 PSMC4P43686 418 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 FCGRTP55899 365 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 ERVK-9P63128 1117 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 ERVK-24P63145 666 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 PLS1Q14651 629 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 SEC23AQ15436 765 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 CTU1Q7Z7A3 348 aaKnown RBP14.54□□□□□ -0.08
DDX56-209ENST00000473924 FAM160B2Q86V87 743 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 MB21D1Q8N884 522 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 KCNB2Q92953 911 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 KIFC2Q96AC6 838 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 TMEM87BQ96K49 555 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 JAKMIP1Q96N16 626 aaKnown RBP14.54□□□□□ -0.08
DDX56-209ENST00000473924 MTA3Q9BTC8 594 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 EFCC1Q9HA90 598 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 CWC22Q9HCG8 908 aaKnown RBP14.54□□□□□ -0.08
DDX56-209ENST00000473924 TXNRD2Q9NNW7 524 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 TRIM17Q9Y577 477 aa14.54□□□□□ -0.08
DDX56-209ENST00000473924 FRMPD2Q68DX3 1309 aaPredicted RBP14.54□□□□□ -0.08
DDX56-209ENST00000473924 ZBED4O75132 1171 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 PSMA5P28066 241 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 CCNA1P78396 465 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 FGD1P98174 961 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 NFXL1Q6ZNB6 911 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 RASGRP2Q7LDG7 609 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 IGDCC4Q8TDY8 1250 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 ARHGAP39Q9C0H5 1083 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 BTBD7Q9P203 1132 aa14.53□□□□□ -0.08
DDX56-209ENST00000473924 CCDC69A6NI79 296 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 VWA5AO00534 786 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 TNPO2O14787 897 aaKnown RBP14.52□□□□□ -0.09
DDX56-209ENST00000473924 CNMDO75829 334 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 HOXD10P28358 340 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 ZNF543Q08ER8 600 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 Q3C1V9 767 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 C8orf34Q49A92 452 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 GPATCH4Q5T3I0 446 aaKnown RBP14.52□□□□□ -0.09
DDX56-209ENST00000473924 COL13A1Q5TAT6 717 aaPredicted RBP14.52□□□□□ -0.09
DDX56-209ENST00000473924 WDR78Q5VTH9 848 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 BLOC1S2Q6QNY1 142 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 DHX32Q7L7V1 743 aaKnown RBP14.52□□□□□ -0.09
DDX56-209ENST00000473924 CATIPQ7Z7H3 387 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 TMTC2Q8N394 836 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 LRRC2Q9BYS8 371 aa14.52□□□□□ -0.09
DDX56-209ENST00000473924 RLFQ13129 1914 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 WDR19Q8NEZ3 1342 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 PARP14Q460N5 1801 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 SH2B2O14492 632 aaPredicted RBP14.51□□□□□ -0.09
DDX56-209ENST00000473924 PLA2G6O60733 806 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 SEC24BO95487 1268 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 GNRH1P01148 92 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 PARP1P09874 1014 aaKnown RBP14.51□□□□□ -0.09
DDX56-209ENST00000473924 GOLGA8HP0CJ92 632 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 SNHG28P0DPA3 235 aa14.51□□□□□ -0.09
DDX56-209ENST00000473924 FDX1P10109 184 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms