RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 BAG1Q99933 345 aaPredicted RBP5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 SRRTQ9BXP5 876 aaKnown RBP5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 DACH1Q9UI36 760 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 SYCP2Q9BX26 1530 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 IL16Q14005 1332 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 RTN2O75298 545 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 CHMLP26374 656 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 GSTT1P30711 240 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 TNNI2P48788 182 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 ERCC6LQ2NKX8 1250 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 CCDC158Q5M9N0 1113 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 USP48Q86UV5 1035 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 TRIM22Q8IYM9 498 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 C3orf58Q8NDZ4 430 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 UBXN4Q92575 508 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 N4BP2L2Q92802 583 aaPredicted RBP5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 EHD4Q9H223 541 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 CAPN10Q9HC96 672 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 MARK1Q9P0L2 795 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 PCDHGB7Q9Y5F8 929 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 PES1O00541 588 aaKnown RBP5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 CHUKO15111 745 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 TBC1D8O95759 1140 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 PREPLQ4J6C6 727 aaPredicted RBP5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 PRPF40BQ6NWY9 871 aaKnown RBP5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 ERMP1Q7Z2K6 904 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 CCDC155Q8N6L0 562 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 THUMPD2Q9BTF0 503 aaKnown RBP5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 FUCA2Q9BTY2 467 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 ORC3Q9UBD5 711 aaPredicted RBP5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 GGT7Q9UJ14 662 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 ROCK1Q13464 1354 aa5.89□□□□□ -1.47
TMEM39A-206ENST00000473684 NALCNQ8IZF0 1738 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 ADGRL2O95490 1459 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 PHF20L1A8MW92 1017 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 KIF4AO95239 1232 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 MAP3K6O95382 1288 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 IMPDH2P12268 514 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 CDC25BP30305 580 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 SOX18P35713 384 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 SCRN1Q12765 414 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 CCDC93Q567U6 631 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 WDR63Q8IWG1 891 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 TCP11Q8WWU5 503 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 MMTAG2Q9BU76 263 aaKnown RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 TLR7Q9NYK1 1049 aaKnown RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 HOXD8P13378 290 aaPredicted RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 PECAM1P16284 738 aaPredicted RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 NFKB1P19838 968 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 SPEM2Q0P670 501 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 AMOTQ4VCS5 1084 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 COL13A1Q5TAT6 717 aaPredicted RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 KCNV1Q6PIU1 500 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 LRRC31Q6UY01 552 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 KCNB2Q92953 911 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 CABS1Q96KC9 395 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 SLC30A3Q99726 388 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 CRACR2AQ9BSW2 395 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 HOMER3Q9NSC5 361 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 NUB1Q9Y5A7 615 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 ERBINQ96RT1 1412 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 AP5Z1O43299 807 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 CDKL5O76039 1030 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 RLBP1P12271 317 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 DCCP43146 1447 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 CCNHP51946 323 aaPredicted RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 PDIA5Q14554 519 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 TBC1D25Q3MII6 688 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 FAM135BQ49AJ0 1406 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 CPLX2Q6PUV4 134 aaKnown RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 KIAA1328Q86T90 577 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 RBM12BQ8IXT5 1001 aaKnown RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 THOC1Q96FV9 657 aaKnown RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 ABHD17AQ96GS6 310 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 GMCL1Q96IK5 515 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 PNMA5Q96PV4 448 aa5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 JPH2Q9BR39 696 aaPredicted RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 ZCCHC17Q9NP64 241 aaKnown RBP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.88□□□□□ -1.47
TMEM39A-206ENST00000473684 PHLPP1O60346 1717 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 IFT172Q9UG01 1749 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 FAM163BP0C2L3 166 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 MVPQ14764 893 aaKnown RBP5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 CC2D1AQ6P1N0 951 aaPredicted RBP5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 PRPF38AQ8NAV1 312 aaKnown RBP5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 BICD2Q8TD16 824 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 MICAL1Q8TDZ2 1067 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 KAT2BQ92831 832 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 TMX3Q96JJ7 454 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 TCF12Q99081 682 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 GMLQ99445 158 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 ABCB6Q9NP58 842 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 ARFGAP3Q9NP61 516 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 PPP1R1BQ9UD71 204 aaPredicted RBP5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 ODF2LQ9ULJ1 636 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 LRRC7Q96NW7 1537 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 NWD2Q9ULI1 1742 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 EFCAB8A8MWE9 144 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 CCDC192P0DO97 292 aa5.87□□□□□ -1.47
TMEM39A-206ENST00000473684 POLD1P28340 1107 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms