RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 OSBPP22059 807 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 GJA8P48165 433 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.07
TPM3-216ENST00000473036 NECTIN1Q15223 517 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 CYB5R4Q7L1T6 521 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 TRIM47Q96LD4 638 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 TOMM22Q9NS69 142 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 TCP11L1Q9NUJ3 509 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 ZSWIM5Q9P217 1185 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 PNMA3Q9UL41 463 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 NR2E3Q9Y5X4 410 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
TPM3-216ENST00000473036 PLXNB2O15031 1838 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 E7EWF7 191 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 PCP11498 1178 aaKnown RBP15.49■□□□□ 0.07
TPM3-216ENST00000473036 GRK4P32298 578 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 IRX3P78415 501 aaPredicted RBP15.49■□□□□ 0.07
TPM3-216ENST00000473036 FAM83BQ5T0W9 1011 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 UBE2Q1Q7Z7E8 422 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 SMCR8Q8TEV9 937 aaPredicted RBP15.49■□□□□ 0.07
TPM3-216ENST00000473036 LPAR1Q92633 364 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 CHMP4CQ96CF2 233 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 TMEM47Q9BQJ4 181 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 ANO2Q9NQ90 1003 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 BTBD7Q9P203 1132 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 MORF4L1Q9UBU8 362 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 STX8Q9UNK0 236 aa15.49■□□□□ 0.07
TPM3-216ENST00000473036 SLC27A2O14975 620 aa15.48■□□□□ 0.07
TPM3-216ENST00000473036 WDR46O15213 610 aaKnown RBP15.48■□□□□ 0.07
TPM3-216ENST00000473036 UBXN2AP68543 259 aa15.48■□□□□ 0.07
TPM3-216ENST00000473036 FAM110CQ1W6H9 321 aa15.48■□□□□ 0.07
TPM3-216ENST00000473036 CREB3L3Q68CJ9 461 aa15.48■□□□□ 0.07
TPM3-216ENST00000473036 LBX2Q6XYB7 198 aa15.48■□□□□ 0.07
TPM3-216ENST00000473036 GMCL1P1Q8NEA9 526 aa15.48■□□□□ 0.07
TPM3-216ENST00000473036 RAET1EQ8TD07 263 aa15.48■□□□□ 0.07
TPM3-216ENST00000473036 RNF41Q9H4P4 317 aaPredicted RBP15.48■□□□□ 0.07
TPM3-216ENST00000473036 SH2D4AQ9H788 454 aa15.48■□□□□ 0.07
TPM3-216ENST00000473036 DSG3P32926 999 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 PSMC4P43686 418 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 GCLCP48506 637 aaPredicted RBP15.47■□□□□ 0.07
TPM3-216ENST00000473036 ANTXR2P58335 489 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 SLFN13Q68D06 897 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 RASEFQ8IZ41 740 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 SLAIN1Q8ND83 568 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 ESR2Q92731 530 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 DPF3Q92784 378 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 SHISA4Q96DD7 197 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 ATG4CQ96DT6 458 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 TANGO6Q9C0B7 1094 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 SENP2Q9HC62 589 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 GOPCQ9HD26 462 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 ADAMTS5Q9UNA0 930 aa15.47■□□□□ 0.07
TPM3-216ENST00000473036 RAD21O60216 631 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 ERVK-9P63128 1117 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 ERVK-24P63145 666 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 COG2Q14746 738 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 KIAA1211Q6ZU35 1233 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 CHST3Q7LGC8 479 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 MB21D2Q8IYB1 491 aaPredicted RBP15.46■□□□□ 0.07
TPM3-216ENST00000473036 ENAHQ8N8S7 591 aaPredicted RBP15.46■□□□□ 0.07
TPM3-216ENST00000473036 REPS2Q8NFH8 660 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 ANKS1AQ92625 1134 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 PAGR1Q9BTK6 254 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 PORCNQ9H237 461 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 PRO3102Q9H379 93 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 SYNPO2Q9UMS6 1093 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 GABRQQ9UN88 632 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 SMCHD1A6NHR9 2005 aa15.46■□□□□ 0.07
TPM3-216ENST00000473036 FLOT1O75955 427 aa15.45■□□□□ 0.06
TPM3-216ENST00000473036 FMNL1O95466 1100 aaPredicted RBP15.45■□□□□ 0.06
TPM3-216ENST00000473036 MCCP23508 829 aa15.45■□□□□ 0.06
TPM3-216ENST00000473036 FCGRTP55899 365 aa15.45■□□□□ 0.06
TPM3-216ENST00000473036 SEC23AQ15436 765 aa15.45■□□□□ 0.06
TPM3-216ENST00000473036 RBM27Q9P2N5 1060 aaKnown RBP15.45■□□□□ 0.06
TPM3-216ENST00000473036 MYPNQ86TC9 1320 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 MYCP01106 439 aaPredicted RBP15.44■□□□□ 0.06
TPM3-216ENST00000473036 TOP1P11387 765 aaKnown RBP15.44■□□□□ 0.06
TPM3-216ENST00000473036 CCL5P13501 91 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 TMEM132BQ14DG7 1078 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 MTFR1Q15390 333 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 KCTD1Q719H9 257 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 GPRC5AQ8NFJ5 357 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 GMCL1Q96IK5 515 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 ZSCAN10Q96SZ4 725 aaPredicted RBP15.44■□□□□ 0.06
TPM3-216ENST00000473036 KRT23Q9C075 422 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 RNF208Q9H0X6 261 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 GPHNQ9NQX3 736 aaPredicted RBP15.44■□□□□ 0.06
TPM3-216ENST00000473036 PPP1R9AQ9ULJ8 1098 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 RABGAP1Q9Y3P9 1069 aa15.44■□□□□ 0.06
TPM3-216ENST00000473036 TNKSO95271 1327 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
TPM3-216ENST00000473036 SNHG28P0DPA3 235 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 BMP3P12645 472 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 ADCK5Q3MIX3 580 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 TTBK2Q6IQ55 1244 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
TPM3-216ENST00000473036 DGKHQ86XP1 1220 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 KCNB2Q92953 911 aa15.43■□□□□ 0.06
TPM3-216ENST00000473036 TTC14Q96N46 770 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms